RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PLK5Q496M5 336 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CT45A2Q5DJT8 189 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 MRPL2Q5T653 305 aaKnown RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 RNLSQ5VYX0 342 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 FIGNL1Q6PIW4 674 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF730Q6ZMV8 503 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 QSOX2Q6ZRP7 698 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 PTCHD4Q6ZW05 846 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 PLEKHM3Q6ZWE6 761 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 MBOAT2Q6ZWT7 520 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 NKAIN4Q8IVV8 208 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 FAM181AQ8N9Y4 354 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 POGLUT1Q8NBL1 392 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 C7orf57Q8NEG2 295 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 OR7G1Q8NGA0 311 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 OR8J1Q8NGP2 316 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 OR4C6Q8NH72 309 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 C9orf43Q8TAL5 461 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 PIGXQ8TBF5 258 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 SAP25Q8TEE9 199 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 OIT3Q8WWZ8 545 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF501Q96CX3 271 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 AHCYL2Q96HN2 611 aaKnown RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 DGAT2Q96PD7 388 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 DUSP23Q9BVJ7 150 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 FUNDC2Q9BWH2 189 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CDCA4Q9BXL8 241 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 POLDIP3Q9BY77 421 aaKnown RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CCDC90BQ9GZT6 254 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CTPS2Q9NRF8 586 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CLN6Q9NWW5 311 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 TESQ9UGI8 421 aaKnown RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 SUSD2Q9UGT4 822 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 KLHL3Q9UH77 587 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 GMEB2Q9UKD1 530 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 PTPRZ1P23471 2315 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 SCN3AQ9NY46 2000 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ABCA7Q8IZY2 2146 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 NPIPA5A0A0B4J1W7 369 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 A0A1W2PPW3 197 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 OR2W5A6NFC9 320 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 TMEM150CB9EJG8 249 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 NPIPA7E9PJI5 369 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 TMX2-CTNND1H3BSU7 103 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 M0R082 166 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 DSCR3O14972 297 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 YKT6O15498 198 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ENTPD6O75354 484 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 CDC123O75794 336 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 NTN1O95631 604 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 FADS2O95864 444 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ONECUT2O95948 504 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 IGKV3-11P04433 115 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 LCKP06239 509 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 STSP08842 583 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ADRA2AP08913 450 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 NPIPA8P0DM63 369 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 MYF5P13349 255 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 TNNI3P19429 210 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 CCNA2P20248 432 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 POU1F1P28069 291 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 C21orf33P30042 268 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 RORAP35398 523 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 TGFBR2P37173 567 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ACAA2P42765 397 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 PCYT1AP49585 367 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 SEPHS1P49903 392 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ST13P50502 369 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 NUDT6P53370 316 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ATP12AP54707 1039 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 GAS1P54826 345 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 PSMD4P55036 377 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 RHAGQ02094 409 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 SIGLEC14Q08ET2 396 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ST3GAL4Q11206 333 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 FOXD4Q12950 439 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 DYNC1I2Q13409 638 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 AQP6Q13520 282 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 FGFBP1Q14512 234 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 GINS1Q14691 196 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 NR0B2Q15466 257 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 OR1Q1Q15612 314 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ZNHIT3Q15649 155 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 AMZ1Q400G9 498 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 MFSD4BQ5TF39 518 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 MEDAGQ5VYS4 303 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 PLAG1Q6DJT9 500 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ACSM5Q6NUN0 579 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 TMEM71Q6P5X7 295 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF613Q6PF04 617 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 WDR88Q6ZMY6 472 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF574Q6ZN55 896 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 TTLL10Q6ZVT0 673 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ARHGAP22Q7Z5H3 698 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 RANBP3LQ86VV4 465 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 CMIPQ8IY22 773 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 RNF113BQ8IZP6 322 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 METTL27Q8N6F8 245 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 Q8N9G6 341 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 RCBTB1Q8NDN9 531 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms