RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TRAPPC2BP0DI82 140 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 TFPIP10646 304 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 CPN2P22792 545 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 HTR1FP30939 366 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 ERVK-21P61565 698 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 CST6Q15828 149 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 DECR1Q16698 335 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 TJAP1Q5JTD0 557 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 ZNF57Q68EA5 555 aaPredicted RBP16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 PSRC1Q6PGN9 363 aaPredicted RBP16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 TTLQ8NG68 377 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 FGF13Q92913 245 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 RFKQ969G6 155 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 KIAA1143Q96AT1 154 aaPredicted RBP16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 ACTRT3Q9BYD9 372 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 EXOGQ9Y2C4 368 aaKnown RBP16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 BTN3A3O00478 584 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 AKAP8O43823 692 aaKnown RBP16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 PRKCAP17252 672 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 STAT5AP42229 794 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 MLLT3P42568 568 aaPredicted RBP16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 OR10A3P58181 314 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 DUSP5Q16690 384 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 KLHL12Q53G59 568 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 MBOAT2Q6ZWT7 520 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 RAB7BQ96AH8 199 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 RPRD1BQ9NQG5 326 aaKnown RBP16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 IRGMA1A4Y4 181 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 GTPBP1O00178 669 aaKnown RBP16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 IGHA1P01876 353 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 MRPL3P09001 348 aaKnown RBP16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 ZNF888P0CJ79 500 aaPredicted RBP16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 MAKP20794 623 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 ABATP80404 500 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 TRMT12Q53H54 448 aaKnown RBP16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 TANGO2Q6ICL3 276 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 VITQ6UXI7 678 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 ZNF836Q6ZNA1 936 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 CXXC5Q7LFL8 322 aaKnown RBP16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 VN1R4Q7Z5H5 301 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 OR2T33Q8NG76 320 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 ZCCHC10Q8TBK6 192 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 IL23AQ9NPF7 189 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 MCUBQ9NWR8 336 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 KLHL28Q9NXS3 571 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 THAP10Q9P2Z0 257 aaPredicted RBP16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 FBXL4Q9UKA2 621 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 ZNF443Q9Y2A4 671 aaPredicted RBP16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 CLUP10909 449 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 NDUFV2P19404 249 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 SLC16A1P53985 500 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 RPE65Q16518 533 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 GANCQ8TET4 914 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 C10orf90Q96M02 699 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 RMI1Q9H9A7 625 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 EXTL2Q9UBQ6 330 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 WDR45Q9Y484 360 aa16.85■□□□□ 0.29
PTP4A3-202ENST00000349124 ZNF860A6NHJ4 632 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 HCN1O60741 890 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 HLA-DMAP28067 261 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 ZNF136P52737 540 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 FAPQ12884 760 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 MFSD12Q6NUT3 480 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 RPTNQ6XPR3 784 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 TRILQ7L0X0 811 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 TTTY10Q9BZA0 68 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 OR52D1Q9H346 318 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 PCDHGB7Q9Y5F8 929 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 STON1Q9Y6Q2 735 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 SPEGQ15772 3267 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 F5P12259 2224 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 TRANK1O15050 2925 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 SLC31A1O15431 190 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 RNF13O43567 381 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 KAT7O95251 611 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 HLA-DQB1P01920 261 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 PRKAR1AP10644 381 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 PRKAR1BP31321 381 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 EVI2BP34910 448 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 E2F1Q01094 437 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 DEFB134Q4QY38 66 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 ARL9Q6T311 187 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 THSD4Q6ZMP0 1018 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 DUSP18Q8NEJ0 188 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 KCNJ15Q99712 375 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 PRSS27Q9BQR3 290 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 HDHD2Q9H0R4 259 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 OR51V1Q9H2C8 321 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 CLEC4AQ9UMR7 237 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 CDH10Q9Y6N8 788 aa16.84■□□□□ 0.29
PTP4A3-202ENST00000349124 CENPBD1B2RD01 187 aa16.83■□□□□ 0.29
PTP4A3-202ENST00000349124 ERVH48-1M5A8F1 160 aa16.83■□□□□ 0.29
PTP4A3-202ENST00000349124 MAGEB4O15481 346 aaPredicted RBP16.83■□□□□ 0.29
PTP4A3-202ENST00000349124 AK4P27144 223 aaPredicted RBP16.83■□□□□ 0.29
PTP4A3-202ENST00000349124 HTR2AP28223 471 aa16.83■□□□□ 0.29
PTP4A3-202ENST00000349124 TEAD1P28347 426 aa16.83■□□□□ 0.29
PTP4A3-202ENST00000349124 GJA4P35212 333 aa16.83■□□□□ 0.29
PTP4A3-202ENST00000349124 INPP1P49441 399 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms