RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 FTMTQ8N4E7 242 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 DEFB119Q8N690 84 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 OR2A12Q8NGT7 310 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 THAP4Q8WY91 577 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 TRIM2Q9C040 744 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 MKRN2Q9H000 416 aaKnown RBP13.85□□□□□ -0.19
NUP50-201ENST00000347635 PIGUQ9H490 435 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 PDE7BQ9NP56 450 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 KLHL21Q9UJP4 597 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 TRBV5-4A0A0C4DH59 114 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 GPX5O75715 221 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 PRSS23O95084 383 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 TRAPPC2P0DI81 140 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 TRAPPC2BP0DI82 140 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 AK4P27144 223 aaPredicted RBP13.85□□□□□ -0.19
NUP50-201ENST00000347635 SOX2P48431 317 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 GAS6Q14393 721 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 SCGB2B2Q4G0G5 96 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 ARHGAP40Q5TG30 622 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 SLC29A4Q7RTT9 530 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 ZNF683Q8IZ20 524 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 TBC1D20Q96BZ9 403 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 B3GNT4Q9C0J1 378 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 BOLA1Q9Y3E2 137 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 H3BSH0 61 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 CREBL2O60519 120 aaPredicted RBP13.85□□□□□ -0.19
NUP50-201ENST00000347635 CSN2P05814 226 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 CLEC2LP0C7M8 214 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 RBMS1P29558 406 aaKnown RBP13.85□□□□□ -0.19
NUP50-201ENST00000347635 SLC6A11P48066 632 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 CRYZQ08257 329 aaKnown RBP13.85□□□□□ -0.19
NUP50-201ENST00000347635 TSPAN31Q12999 210 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 HACD4Q5VWC8 232 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 PLXDC1Q8IUK5 500 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 KIAA1958Q8N8K9 716 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 GPER1Q99527 375 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 GXYLT2A0PJZ3 443 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 TFPIP10646 304 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 DRD5P21918 477 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 SLC14A1Q13336 389 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 FAM109AQ8N4B1 249 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 INO80EQ8NBZ0 244 aaPredicted RBP13.84□□□□□ -0.19
NUP50-201ENST00000347635 OR52E2Q8NGJ4 325 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 SLC25A46Q96AG3 418 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
NUP50-201ENST00000347635 RBBP9O75884 186 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 AK1P00568 194 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 PTGER1P34995 402 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 CASRP41180 1078 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 SLC1A3P43003 542 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 OCLNQ16625 522 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 PGBD2Q6P3X8 592 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 TMED4Q7Z7H5 227 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 ATCAYQ86WG3 371 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 OR4N5Q8IXE1 308 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 CUEDC1Q9NWM3 386 aaPredicted RBP13.84□□□□□ -0.19
NUP50-201ENST00000347635 NEU3Q9UQ49 428 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 POLR1CO15160 346 aaPredicted RBP13.84□□□□□ -0.19
NUP50-201ENST00000347635 PAHP00439 452 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 CXCR1P25024 350 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 APEX1P27695 318 aaKnown RBP13.84□□□□□ -0.19
NUP50-201ENST00000347635 RBM34P42696 430 aaKnown RBP13.84□□□□□ -0.19
NUP50-201ENST00000347635 KCNJ5P48544 419 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 HOXC5Q00444 222 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 ENTPD8Q5MY95 495 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 FCRLBQ6BAA4 426 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 PTCRAQ6ISU1 281 aaPredicted RBP13.84□□□□□ -0.19
NUP50-201ENST00000347635 VRK2Q86Y07 508 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 WDR20Q8TBZ3 569 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 SLC25A36Q96CQ1 311 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 TIMM29Q9BSF4 260 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 THAP10Q9P2Z0 257 aaPredicted RBP13.84□□□□□ -0.19
NUP50-201ENST00000347635 MLXQ9UH92 298 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 RASD1Q9Y272 281 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 A6NL46 340 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 CLEC3AO75596 197 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 CCKBRP32239 447 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 SNTA1Q13424 505 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 ZNF77Q15935 545 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 MFSD4AQ8N468 514 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 DNAJC5GQ8N7S2 189 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 OR2T35Q8NGX2 323 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 BTBD2Q9BX70 525 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 HDAC8Q9BY41 377 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 BABAM2Q9NXR7 383 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 KLHL9Q9P2J3 617 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 EPHA6Q9UF33 1036 aa13.84□□□□□ -0.19
NUP50-201ENST00000347635 KIR2DS5A0A0G2JLQ3 304 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 A0A0G2JNG1 304 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 KIR2DS3K7RE56 304 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 FZD6O60353 706 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 PPP1R3DO95685 299 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 CHRNB1P11230 501 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 TYRP1P17643 537 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 YPEL5P62699 121 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 TIAL1Q01085 375 aaKnown RBP eCLIP13.83□□□□□ -0.19
NUP50-201ENST00000347635 SELENBP1Q13228 472 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 KIR2DS5Q14953 304 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 PRSS36Q5K4E3 855 aa13.83□□□□□ -0.19
NUP50-201ENST00000347635 FIGNL1Q6PIW4 674 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms