RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 ZNF91Q05481 1191 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR1Q1Q15612 314 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SNAPC1Q16533 368 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PDZK1Q5T2W1 519 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 C11orf74Q86VG3 221 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 LSRQ86X29 649 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 C9orf43Q8TAL5 461 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NDNFQ8TB73 568 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CRELD1Q96HD1 420 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 LRR1Q96L50 414 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PRSS27Q9BQR3 290 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OCEL1Q9H607 264 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NLGN3Q9NZ94 848 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 KLF4O43474 513 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CLPXO76031 633 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DBTP11182 482 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CSF2RBP32927 897 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR1D4P47884 311 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NCS1P62166 190 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NR1D2Q14995 579 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SYT14P1Q58G82 188 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CLEC12AQ5QGZ9 265 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SLC25A30Q5SVS4 291 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NPSR1Q6W5P4 371 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CARFQ8N187 725 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DEFB123Q8N688 67 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF614Q8N883 585 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 RCBTB1Q8NDN9 531 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 C16orf52Q8NHV5 167 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 LGALS12Q96DT0 336 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ARSGQ96EG1 525 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ELF4Q99607 663 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TSSK6Q9BXA6 273 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 POLR2J2Q9GZM3 115 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR10A5Q9H207 317 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ETAA1Q9NY74 926 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 M0R3G1 203 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 HYAL3O43820 417 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 FMO6PO60774 539 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 HSMCR30P0CW71 290 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GNSP15586 552 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DRD5P21918 477 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 STAT5AP42229 794 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PI4KAP42356 2102 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ARRB1P49407 418 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MLLT10P55197 1068 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GPLD1P80108 840 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 FUT7Q11130 342 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SHBQ15464 509 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NNATQ16517 81 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ARMCX4Q5H9R4 360 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MEDAGQ5VYS4 303 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 WDR88Q6ZMY6 472 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MRGPREQ86SM8 312 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CACTIN-AS1Q8N1I8 211 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 POGLUT1Q8NBL1 392 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 WDR36Q8NI36 951 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CNOT9Q92600 299 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 FGF11Q92914 225 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF578Q96N58 590 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR5M11Q96RB7 305 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 YIPF2Q9BWQ6 316 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PLGRKTQ9HBL7 147 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 IL20Q9NYY1 176 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TESQ9UGI8 421 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MUC3AQ02505 3323 aa13.07□□□□□ -0.32
CDK5RAP1-202ENST00000346416 C19orf67A6NJJ6 358 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 A8MU76 341 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CDC42EP2O14613 210 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GUSBP08236 651 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CT45A8P0DMV1 189 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CT45A9P0DMV2 189 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 BNC1Q01954 994 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SERTAD2Q14140 314 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MED22Q15528 200 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CT45A2Q5DJT8 189 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PRAMEF17Q5VTA0 474 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF367Q7RTV3 350 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SLC46A3Q7Z3Q1 461 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR1L3Q8NH93 324 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 RNF217Q8TC41 542 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OSTF1Q92882 214 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TMEM80Q96HE8 168 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF582Q96NG8 517 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PTCHD1Q96NR3 888 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 Q9N2J8 555 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 LANCL2Q9NS86 450 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DHCR7Q9UBM7 475 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MUTYHQ9UIF7 546 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 VPS13AQ96RL7 3174 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 WDR87Q6ZQQ6 2873 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 EFCAB9A8MZ26 197 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 AIREO43918 545 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 LYPD3O95274 346 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 INHBBP09529 407 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 FOLR1P15328 257 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GADD45AP24522 165 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TGFBR1P36897 503 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DHPSP49366 369 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms