RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ATP6V1B2P21281 511 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 SLC7A1P30825 629 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 WNT3P56703 355 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 TAF11Q15544 211 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 CYP2R1Q6VVX0 501 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 IKBIPQ70UQ0 350 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 WDSUB1Q8N9V3 476 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 OR7A2PQ8NGA2 310 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 OR8J2Q8NGG1 315 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 ELP4Q96EB1 424 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 GIMAP5Q96F15 307 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 OTUB1Q96FW1 271 aaPredicted RBP14.67□□□□□ -0.06
RAB5C-201ENST00000346213 PAIP1Q9H074 479 aaKnown RBP14.67□□□□□ -0.06
RAB5C-201ENST00000346213 VCX3BQ9H321 246 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 SERHLQ9NQF3 203 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 MIEF1Q9NQG6 463 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 SIRT3Q9NTG7 399 aaPredicted RBP14.67□□□□□ -0.06
RAB5C-201ENST00000346213 CNIH4Q9P003 139 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 EGFL7Q9UHF1 273 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 C19orf53Q9UNZ5 99 aaPredicted RBP14.67□□□□□ -0.06
RAB5C-201ENST00000346213 SNX13Q9Y5W8 968 aa14.67□□□□□ -0.06
RAB5C-201ENST00000346213 GXYLT2A0PJZ3 443 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 PLOD2O00469 737 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 GNB5O14775 395 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 ARPC2O15144 300 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 HOXB9P17482 250 aaPredicted RBP14.66□□□□□ -0.06
RAB5C-201ENST00000346213 PTPN6P29350 595 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 KIR3DL1P43629 444 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 GSTM5P46439 218 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 GAS1P54826 345 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 HSPB3Q12988 150 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 SELPLGQ14242 412 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.66□□□□□ -0.06
RAB5C-201ENST00000346213 PGS1Q32NB8 556 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 GXYLT1Q4G148 440 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 ARHGAP11AQ6P4F7 1023 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 SEM1Q6ZVN7 128 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 CAMKMTQ7Z624 323 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 MSRB3Q8IXL7 192 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 SLC34A3Q8N130 599 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 EFHD2Q96C19 240 aaPredicted RBP14.66□□□□□ -0.06
RAB5C-201ENST00000346213 REEP4Q9H6H4 257 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 SLC25A37Q9NYZ2 338 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 RIMS3Q9UJD0 308 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 AP4S1Q9Y587 144 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 KIAA1549Q9HCM3 1950 aa14.66□□□□□ -0.06
RAB5C-201ENST00000346213 ACOT7O00154 380 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ICOSLGO75144 302 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 LAMP1P11279 417 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ACADSP16219 412 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 MAP3K8P41279 467 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 MTPNP58546 118 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 EIPR1Q53HC9 387 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 OGFRL1Q5TC84 451 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 OR4F3Q6IEY1 312 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ZAR1Q86SH2 424 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 GALNT10Q86SR1 603 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 IFNEQ86WN2 208 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 SLC44A2Q8IWA5 706 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 FBXO30Q8TB52 745 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 SLCO4A1Q96BD0 722 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 HSPBAP1Q96EW2 488 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 SLC35A4Q96G79 324 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ADOQ96SZ5 270 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 KLHDC3Q9BQ90 382 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 FAM120CQ9NX05 1096 aaKnown RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 SLC6A5Q9Y345 797 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 A0A087WV62 115 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 E9PLN8 166 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 AQP7O14520 342 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 SCAMP2O15127 329 aaKnown RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 PDPK1O15530 556 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 TBX19O60806 448 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 SCN2BO60939 215 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 C1QCP02747 245 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ATP6V1C1P21283 382 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 MPIP34949 423 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 PER3P56645 1201 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 NUP107P57740 925 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ZNF155Q12901 538 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 GAB1Q13480 694 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 TRIP10Q15642 601 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 EXOSC6Q5RKV6 272 aaKnown RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 PLXDC2Q6UX71 529 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 LSRQ86X29 649 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 CCDC71Q8IV32 467 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 DND1Q8IYX4 353 aaKnown RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 LILRA2Q8N149 483 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ZNF808Q8N4W9 903 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 HOXB13Q92826 284 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ZNF764Q96H86 408 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ZNF597Q96LX8 424 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ZNF583Q96ND8 569 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ZNF184Q99676 751 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ECSITQ9BQ95 431 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 VKORC1Q9BQB6 163 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 KLHL4Q9C0H6 718 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 ARMC1Q9NVT9 282 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 PRODH2Q9UF12 536 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms