RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 H0YC42 278 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 DVL2O14641 736 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 ANKRD28O15084 1053 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 GMFGO60234 142 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 SNUPNO95149 360 aaKnown RBP13.04□□□□□ -0.32
HMGN3-202ENST00000344726 CAPN3P20807 821 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 TBXA2RP21731 343 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 PRIM2P49643 509 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
HMGN3-202ENST00000344726 POU6F2P78424 691 aaPredicted RBP13.04□□□□□ -0.32
HMGN3-202ENST00000344726 FOXF2Q12947 444 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 MYBPHQ13203 477 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 TP53BP2Q13625 1128 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 RCAN2Q14206 197 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 SF3B4Q15427 424 aaKnown RBP eCLIP13.04□□□□□ -0.326e-7■■■■□ 26.7
HMGN3-202ENST00000344726 PGS1Q32NB8 556 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 CDC73Q6P1J9 531 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 AAGABQ6PD74 315 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 ARSKQ6UWY0 536 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 ZZZ3Q8IYH5 903 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 CLECL1Q8IZS7 167 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 GATSQ8NAP1 163 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 OR5AK3PQ8NH89 298 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 UCN2Q96RP3 112 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 PRPF18Q99633 342 aaKnown RBP13.04□□□□□ -0.32
HMGN3-202ENST00000344726 ZNF559Q9BR84 538 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 BTBD2Q9BX70 525 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 PIGUQ9H490 435 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 MEAF6Q9HAF1 191 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 DUSP22Q9NRW4 184 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 ZNF629Q9UEG4 869 aaPredicted RBP13.04□□□□□ -0.32
HMGN3-202ENST00000344726 ZNF337Q9Y3M9 751 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 OR2M5A3KFT3 312 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 SHISA8B8ZZ34 492 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 SYT5O00445 386 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 SDHDO14521 159 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 SCN2BO60939 215 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 SNNO75324 88 aaPredicted RBP13.03□□□□□ -0.32
HMGN3-202ENST00000344726 ERLIN1O75477 346 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 NGFRP08138 427 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 ALDOCP09972 364 aaKnown RBP13.03□□□□□ -0.32
HMGN3-202ENST00000344726 UQCRC1P31930 480 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 CLK3P49761 638 aaKnown RBP13.03□□□□□ -0.32
HMGN3-202ENST00000344726 ASCL1P50553 236 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 SUCLG1P53597 346 aaKnown RBP13.03□□□□□ -0.32
HMGN3-202ENST00000344726 PHC1P78364 1004 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 C17orf67Q0P5P2 114 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 GANABQ14697 944 aaKnown RBP13.03□□□□□ -0.32
HMGN3-202ENST00000344726 LSM12Q3MHD2 195 aaKnown RBP13.03□□□□□ -0.32
HMGN3-202ENST00000344726 FBXL19-AS1Q494R0 122 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 RAET1LQ5VY80 246 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 CLEC4FQ8N1N0 589 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 NATD1Q8N6N6 113 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 OR56A1Q8NGH5 318 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 SFXN5Q8TD22 340 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 DTNBP1Q96EV8 351 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 CHMP6Q96FZ7 201 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 STACQ99469 402 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 NPAS1Q99742 590 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 ACTRT3Q9BYD9 372 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 SERHL2Q9H4I8 314 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 NEUROD4Q9HD90 331 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 GIN1Q9NXP7 522 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 CRIM1Q9NZV1 1036 aa13.03□□□□□ -0.32
HMGN3-202ENST00000344726 NPIPA5A0A0B4J1W7 369 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 NPIPA7E9PJI5 369 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 CFLARO15519 480 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 HCRTR2O43614 444 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 NDUFB5O43674 189 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 TGM6O95932 706 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 NPIPA8P0DM63 369 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 TMIGD3P0DMS9 266 aaPredicted RBP13.02□□□□□ -0.33
HMGN3-202ENST00000344726 LBPP18428 481 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 CTSSP25774 331 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 RNF144AP50876 292 aaPredicted RBP13.02□□□□□ -0.33
HMGN3-202ENST00000344726 SLC18A1P54219 525 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 RPS26P62854 115 aaKnown RBP13.02□□□□□ -0.33
HMGN3-202ENST00000344726 CD226Q15762 336 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 BCL2A1Q16548 175 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 TMEM44Q2T9K0 475 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 SPDYE7PQ495Y7 208 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 TMEM200AQ86VY9 491 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 UBQLNLQ8IYU4 475 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 OR8J2Q8NGG1 315 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 OR5D16Q8NGK9 328 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 WNT2BQ93097 391 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 TEX37Q96LM6 180 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 OR7D2Q96RA2 312 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 DPY30Q9C005 99 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 PTGES2Q9H7Z7 377 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 UBQLN4Q9NRR5 601 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 JKAMPQ9P055 326 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 VDAC3Q9Y277 283 aa13.02□□□□□ -0.33
HMGN3-202ENST00000344726 MAP1AP78559 2803 aaPredicted RBP13.02□□□□□ -0.33
HMGN3-202ENST00000344726 RNASET2O00584 256 aaKnown RBP13.01□□□□□ -0.33
HMGN3-202ENST00000344726 OIP5O43482 229 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 CTAG2O75638 210 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 RCBTB2O95199 551 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 PEPDP12955 493 aa13.01□□□□□ -0.33
HMGN3-202ENST00000344726 LCN1P31025 176 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms