RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 CACYBPQ9HB71 228 aaKnown RBP18.01■□□□□ 0.47
COL9A3-201ENST00000343916 FGF20Q9NP95 211 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-201ENST00000343916 SNTNA6NMZ2 147 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 OR5F1O95221 314 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 AGR2O95994 175 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 LALBAP00709 142 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 ZNF10P21506 573 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-201ENST00000343916 RFX3P48380 749 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 DUSP8Q13202 625 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 SRSF5Q13243 272 aaKnown RBP18.01■□□□□ 0.47
COL9A3-201ENST00000343916 DEFB110Q30KQ9 67 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 SLC37A2Q8TED4 501 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 OSTF1Q92882 214 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 SAMD8Q96LT4 415 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 DPH1Q9BZG8 443 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 ZNF350Q9GZX5 532 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 HOXD1Q9GZZ0 328 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 CD207Q9UJ71 328 aa18.01■□□□□ 0.47
COL9A3-201ENST00000343916 C2orf74A8MZ97 194 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 CYR61O00622 381 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 MSL3P1P0C860 447 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 STAT5AP42229 794 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 VSX2P58304 361 aaPredicted RBP18■□□□□ 0.47
COL9A3-201ENST00000343916 MRPS21P82921 87 aaKnown RBP18■□□□□ 0.47
COL9A3-201ENST00000343916 COX18Q8N8Q8 333 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 PFN4Q8NHR9 129 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 GAS2L1Q99501 681 aaPredicted RBP18■□□□□ 0.47
COL9A3-201ENST00000343916 C20orf141Q9NUB4 165 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 A0A0C4DFX4 3053 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 TMEM129A0AVI4 362 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 SGK494L7N484 410 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 SEMA4FO95754 770 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 AZGP1P25311 298 aaKnown RBP18■□□□□ 0.47
COL9A3-201ENST00000343916 LTBRP36941 435 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 CASP3P42574 277 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 GCGRP47871 477 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 BNC1Q01954 994 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 HNRNPA0Q13151 305 aaKnown RBP18■□□□□ 0.47
COL9A3-201ENST00000343916 C1orf61Q13536 156 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 PGGHGQ32M88 737 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 AADACL4Q5VUY2 407 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 GDPD3Q7L5L3 318 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 ZNF619Q8N2I2 560 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 PRSS27Q9BQR3 290 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 ATP13A2Q9NQ11 1180 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 MUTYHQ9UIF7 546 aa18■□□□□ 0.47
COL9A3-201ENST00000343916 ATP1B1P05026 303 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 TYRP1P17643 537 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 SDC2P34741 201 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 SLC1A3P43003 542 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 YPEL5P62699 121 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 IFITM2Q01629 132 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 RUNX1T1Q06455 604 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 CRTC2Q53ET0 693 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-201ENST00000343916 ZC3H14Q6PJT7 736 aaKnown RBP17.99■□□□□ 0.47
COL9A3-201ENST00000343916 OR8H2Q8N162 312 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 CELF2-AS1Q8N7Q2 184 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 SLC25A46Q96AG3 418 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 GDF15Q99988 308 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 RBCK1Q9BYM8 510 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 PRRG3Q9BZD7 231 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 ENKD1Q9H0I2 346 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 LYRM4Q9HD34 91 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 CLCA2Q9UQC9 943 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 SF3B6Q9Y3B4 125 aaKnown RBP17.99■□□□□ 0.47
COL9A3-201ENST00000343916 V9GYH0 126 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 SYNDIG1LA6NDD5 238 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 SOCS6O14544 535 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 STX11O75558 287 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 PTTG1O95997 202 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 ZNF24P17028 368 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 PRICKLE4Q2TBC4 344 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 SMARCD3Q6STE5 483 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 CCBE1Q6UXH8 406 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-201ENST00000343916 ZAR1Q86SH2 424 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 CSNK1A1LQ8N752 337 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 ZFPM2Q8WW38 1151 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 IL21RQ9HBE5 538 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 FAM60AQ9NP50 221 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 HINT3Q9NQE9 182 aaKnown RBP17.99■□□□□ 0.47
COL9A3-201ENST00000343916 NLGN3Q9NZ94 848 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 MAT2BQ9NZL9 334 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 SLCO1B1Q9Y6L6 691 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 LRP4O75096 1905 aa17.99■□□□□ 0.47
COL9A3-201ENST00000343916 GXYLT2A0PJZ3 443 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 GPR75O95800 540 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 TNFP01375 233 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 IGHV4-34P06331 123 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 ZGLP1P0C6A0 271 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 PSPHP78330 225 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 MADCAM1Q13477 382 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 RAB30Q15771 203 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 PLK5Q496M5 336 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 DGAT2L6Q6ZPD8 337 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 RANBP3LQ86VV4 465 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-201ENST00000343916 OR2T33Q8NG76 320 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 GPBAR1Q8TDU6 330 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 RSC1A1Q92681 617 aa17.98■□□□□ 0.47
COL9A3-201ENST00000343916 DCLRE1CQ96SD1 692 aaKnown RBP17.98■□□□□ 0.47
COL9A3-201ENST00000343916 ARHGAP9Q9BRR9 750 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms