RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 OR8D2Q9GZM6 311 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 QRSL1Q9H0R6 528 aaKnown RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 SP140LQ9H930 580 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 CPNE5Q9HCH3 593 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 DNAJB9Q9UBS3 223 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 SLC30A4O14863 429 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF682O95780 498 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 GABRA3P34903 492 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 ANXA11P50995 505 aaKnown RBP13.6□□□□□ -0.23
CXCL12-201ENST00000343575 NOVA1P51513 510 aaKnown RBP13.6□□□□□ -0.23
CXCL12-201ENST00000343575 KCNJ10P78508 379 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 CHRNEQ04844 493 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 SPCS2Q15005 226 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 INAQ16352 499 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 ARHGAP11BQ3KRB8 267 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 C6orf15Q6UXA7 325 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-201ENST00000343575 PLEKHG7Q6ZR37 379 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 SLC16A12Q6ZSM3 486 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 HMGN2P46Q86SG4 172 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 ZAR1Q86SH2 424 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 COMTD1Q86VU5 262 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 TMPRSS12Q86WS5 348 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 SLC30A8Q8IWU4 369 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 CHDHQ8NE62 594 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-201ENST00000343575 OR7G1Q8NGA0 311 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 GPR32P1Q8NGA4 272 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 TMBIM1Q969X1 311 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 HSH2DQ96JZ2 352 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 NODALQ96S42 347 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 CRB3Q9BUF7 120 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 OSBPL10Q9BXB5 764 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 ITPAQ9BY32 194 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 NTN4Q9HB63 628 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 FAM118AQ9NWS6 357 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 DLL3Q9NYJ7 618 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF223Q9UK11 482 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-201ENST00000343575 PADI1Q9ULC6 663 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 SAMD4AQ9UPU9 718 aaKnown RBP13.6□□□□□ -0.23
CXCL12-201ENST00000343575 LIPT1Q9Y234 373 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF451Q9Y4E5 1061 aa13.6□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF99A8MXY4 864 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 C5orf58C9J3I9 102 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 M0R3G1 203 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 TNFSF15O95150 251 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 EPPINO95925 133 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 RYKP34925 604 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 MAGEA2P43356 314 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 CRISP3P54108 245 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF155Q12901 538 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 ELOAQ14241 798 aaKnown RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 CYP27C1Q4G0S4 372 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 OTUD3Q5T2D3 398 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 FRRS1Q6ZNA5 592 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 PRSS48Q7RTY5 328 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 STK32CQ86UX6 486 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 CADM3Q8N126 398 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 APCDD1LQ8NCL9 501 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 C7orf57Q8NEG2 295 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 OR14A16Q8NHC5 309 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 GPR151Q8TDV0 419 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 APOBEC4Q8WW27 367 aaKnown RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 C8orf44Q96CB5 159 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 SLC47A1Q96FL8 570 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 C7orf34Q96L11 122 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 WFDC6Q9BQY6 131 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 DOHHQ9BU89 302 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 RPS6KA6Q9UK32 745 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 PPIEQ9UNP9 301 aaKnown RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 CHST2Q9Y4C5 530 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 NINQ8N4C6 2090 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 CENPVL1A0A0U1RR11 272 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 G3V2T6 193 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 IGKV1D-16P01601 117 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 TNFRSF1BP20333 461 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 GSSP48637 474 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 MLLT10P55197 1068 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 VLDLRP98155 873 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 CTF1Q16619 201 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 GPAT3Q53EU6 434 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 DCST2Q5T1A1 773 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 PRAMEF8Q5VWM4 474 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 PRAMEF7Q5VXH5 474 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 TYW3Q6IPR3 259 aaKnown RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 TUBA3EQ6PEY2 450 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 TBPL2Q6SJ96 375 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 C9orf40Q8IXQ3 194 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 OR1N1Q8NGS0 311 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 ADAMTS14Q8WXS8 1223 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 DAZLQ92904 295 aaKnown RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 ADIPOR1Q96A54 375 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 TPD52L3Q96J77 140 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 COL21A1Q96P44 957 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF350Q9GZX5 532 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 SAP130Q9H0E3 1048 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 TOR3AQ9H497 397 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 MAGIXQ9H6Y5 334 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 EXD2Q9NVH0 621 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 KCNE5Q9UJ90 142 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 NXT1Q9UKK6 140 aaKnown RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 MKLN1Q9UL63 735 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms