RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 GRK5P34947 590 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 PCYT1AP49585 367 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 OTPQ5XKR4 325 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 SLC27A4Q6P1M0 643 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 C16orf47Q6ZP98 133 aaPredicted RBP9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 ZNF420Q8TAQ5 688 aaPredicted RBP9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 IPCEF1Q8WWN9 437 aaPredicted RBP9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 MOAP1Q96BY2 351 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 NECAB3Q96P71 396 aaPredicted RBP9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 FTSJ1Q9UET6 329 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 FAM171A2A8MVW0 826 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 TGFBR3LH3BV60 316 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 CYR61O00622 381 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 BMP7P18075 431 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 IFNGR2P38484 337 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 CDH11P55287 796 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 RAB38P57729 211 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 CRYZQ08257 329 aaKnown RBP9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 OR1Q1Q15612 314 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 DGUOKQ16854 277 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 PLBD1Q6P4A8 553 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 SAMD14Q8IZD0 417 aaPredicted RBP9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 CDRT4Q8N9R6 151 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 OR8D4Q8NGM9 314 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 C1GALT1C1Q96EU7 318 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 RNFT2Q96EX2 444 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 SHDQ96IW2 340 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 PITX2Q99697 317 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 MKL2Q9ULH7 1088 aa9.45□□□□□ -0.9
RBFOX1-202ENST00000340209 C2orf72A6NCS6 295 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 ZAR1LA6NP61 321 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 GTPBP1O00178 669 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 HOXC4P09017 264 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 SMSP52788 366 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 FAM53BQ14153 422 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 NSDHLQ15738 373 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 INAQ16352 499 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 ZNF628Q5EBL2 1059 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 KIF18BQ86Y91 864 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 SLC35F3Q8IY50 421 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 ZNF619Q8N2I2 560 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CAMKK1Q8N5S9 505 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 FANK1Q8TC84 345 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CTRCQ99895 268 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TMEM27Q9HBJ8 222 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TIMMDC1Q9NPL8 285 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 RP1L1Q8IWN7 2480 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TTC36A6NLP5 189 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 SOCS6O14544 535 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CDC42EP2O14613 210 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CD1CP29017 333 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 GRPRP30550 384 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 PHF19Q5T6S3 580 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CDK20Q8IZL9 346 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 DTX3Q8N9I9 347 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 OR52L1Q8NGH7 329 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TANKQ92844 425 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 FAM131CQ96AQ9 280 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 ADOQ96SZ5 270 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 FOLH1BQ9HBA9 442 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TRPV5Q9NQA5 729 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 DAPK2Q9UIK4 370 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 KCNE5Q9UJ90 142 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 ZNF229Q9UJW7 825 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 C19orf53Q9UNZ5 99 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 THADAQ6YHU6 1953 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TBX19O60806 448 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CSTAP01040 98 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CENPAP49450 140 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 COPZ1P61923 177 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 C1DQ13901 141 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CTF1Q16619 201 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 HLA-DQA1Q5Y7H0 255 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CPOQ8IVL8 374 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 OR2L13Q8N349 312 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 OR10H4Q8NGA5 316 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 ANKRD9Q96BM1 317 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TM4SF19Q96DZ7 209 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CNDP2Q96KP4 475 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TUBA1CQ9BQE3 449 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 NDC1Q9BTX1 674 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TMED9Q9BVK6 235 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 TEX12Q9BXU0 123 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 RACGAP1Q9H0H5 632 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 PIGUQ9H490 435 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 PLGRKTQ9HBL7 147 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 Q9N2J8 555 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 REV1Q9UBZ9 1251 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 CHST2Q9Y4C5 530 aa9.44□□□□□ -0.9
RBFOX1-202ENST00000340209 SCO2O43819 266 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 CBX7O95931 251 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 PAICSP22234 425 aaKnown RBP9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 DNASE1L3Q13609 305 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 PRICKLE4Q2TBC4 344 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 C14orf28Q4W4Y0 310 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 OR8J1Q8NGP2 316 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 ZDHHC12Q96GR4 267 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 NECTIN3Q9NQS3 549 aa9.43□□□□□ -0.9
RBFOX1-202ENST00000340209 CUTCQ9NTM9 273 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms