RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 LAS2Q8IYD9 372 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 OR5W2Q8NH69 310 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ADAMTS19Q8TE59 1207 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 DUSP19Q8WTR2 217 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 CHPT1Q8WUD6 406 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 SLC41A3Q96GZ6 507 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 C4orf36Q96KX1 117 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 PHB2Q99623 299 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 PRMT8Q9NR22 394 aaPredicted RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 SDHAF3Q9NRP4 125 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 WSB2Q9NYS7 404 aaPredicted RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 CABIN1Q9Y6J0 2220 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 TRBV4-1A0A0J9YWV2 114 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ANKRD33BA6NCL7 494 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 H3BML4 177 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 SGCEO43556 437 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 DDCP20711 480 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 CERS1P27544 350 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 CCR7P32248 378 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 MC2RQ01718 297 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 CD300CQ08708 224 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 Q6ZSR9 355 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 OR8J2Q8NGG1 315 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 OR14K1Q8NGZ2 314 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ST8SIA2Q92186 375 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ZNF705GA8MUZ8 300 aaPredicted RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 GFRA2O00451 464 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 EMC8O43402 210 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 MPIG6BO95866 241 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 JMJD7P0C870 316 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ZNF30P17039 623 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 GLP1RP43220 463 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 SPINT3P49223 89 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ARRB1P49407 418 aaPredicted RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 CCR6P51684 374 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 RAB4BP61018 213 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 FCN2Q15485 313 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 PODNL1Q6PEZ8 512 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 KDELC1Q6UW63 502 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 Q6ZNX1 250 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 TRIM46Q7Z4K8 759 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 OR13F1Q8NGS4 319 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ADAMTS16Q8TE57 1224 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 FAM71F1Q96KD3 344 aaPredicted RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 SGCZQ96LD1 299 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 SAMD11Q96NU1 681 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 HHIPQ96QV1 700 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 NIPSNAP1Q9BPW8 284 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ZNF559Q9BR84 538 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 PARP12Q9H0J9 701 aaKnown RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 MSRAQ9UJ68 235 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 KCNS2Q9ULS6 477 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 GABRQQ9UN88 632 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 RHBDD3Q9Y3P4 386 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 C4AP0C0L4 1744 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 C4BP0C0L5 1744 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 RANBP2P49792 3224 aaKnown RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 CDC14CA4D256 554 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 H7C417 338 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 SOCS6O14544 535 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 FKTNO75072 461 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ARAFP10398 606 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 PRSS3P35030 304 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 MAGEA6P43360 314 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 KCNJ5P48544 419 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 TAS2R38P59533 333 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ZNF280AP59817 542 aaPredicted RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 SORDQ00796 357 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 PHF19Q5T6S3 580 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 CPZQ66K79 652 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 PM20D1Q6GTS8 502 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 TMEM205Q6UW68 189 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 APOOLQ6UXV4 268 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 FCRLAQ7L513 359 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 C16orf58Q96GQ5 468 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 OR1F2PQ96R84 312 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 EPYCQ99645 322 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 PITX2Q99697 317 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 C11orf54Q9H0W9 315 aaPredicted RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 MAGIXQ9H6Y5 334 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 GPN2Q9H9Y4 310 aaPredicted RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 VSX1Q9NZR4 365 aaPredicted RBP8.2□□□□□ -1.1
RTN3-202ENST00000339997 GNG13Q9P2W3 67 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 ABCC6O95255 1503 aa8.2□□□□□ -1.1
RTN3-202ENST00000339997 GLTPD2A6NH11 291 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 C1orf196B1AJZ1 125 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 SC5DO75845 299 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 RAB3DO95716 219 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 AGR2O95994 175 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 HOXB5P09067 269 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 HOXB2P14652 356 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 CD1EP15812 388 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 MAOBP27338 520 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 IDH3GP51553 393 aaPredicted RBP8.19□□□□□ -1.1
RTN3-202ENST00000339997 RPS25P62851 125 aaKnown RBP8.19□□□□□ -1.1
RTN3-202ENST00000339997 KIAA1211LQ6NV74 962 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 VRK2Q86Y07 508 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 NRROSQ86YC3 692 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 FAM109AQ8N4B1 249 aa8.19□□□□□ -1.1
RTN3-202ENST00000339997 HCAR2Q8TDS4 363 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms