RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PTGES2Q9H7Z7 377 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 PPCSQ9HAB8 311 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 C3orf14Q9HBI5 128 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 ATP6V1HQ9UI12 483 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 MRTO4Q9UKD2 239 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 ABCG2Q9UNQ0 655 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 ACANP16112 2415 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 IGLV3-32A0A0A0MS00 114 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 A0A0J9YW62 118 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 A0A1W2PRB8 838 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 EIF1AYO14602 144 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 MSTNO14793 375 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 NDUFB5O43674 189 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 EFNA2O43921 213 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 SKAP2O75563 359 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 CHEK2O96017 543 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 HMGN2P05204 90 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 ALOX5P09917 674 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 TBXA2RP21731 343 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 DIO3P55073 304 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 RIPPLY3P57055 190 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 ADAM8P78325 824 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 PSPHP78330 225 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 FOXD4Q12950 439 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 LASP1Q14847 261 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 CD226Q15762 336 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 SGCBQ16585 318 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 EXOSC6Q5RKV6 272 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 LRIG3Q6UXM1 1119 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 CLEC4FQ8N1N0 589 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 ZFP28Q8NHY6 868 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 JADE3Q92613 823 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 NINJ1Q92982 152 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 ARSGQ96EG1 525 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 ZBED6CLQ96FA7 236 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 CHMP6Q96FZ7 201 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 ZC3HAV1LQ96H79 300 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 PKNOX2Q96KN3 472 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 PPP1R36Q96LQ0 422 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 DACH2Q96NX9 599 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 PIGQQ9BRB3 760 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 TRMOQ9BU70 441 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 TMEM185BQ9H7F4 350 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 CXorf36Q9H7Y0 433 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 ACSS1Q9NUB1 689 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 ZCCHC3Q9NUD5 404 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 MKS1Q9NXB0 559 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 LGALS13Q9UHV8 139 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 MID2Q9UJV3 735 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 SNX8Q9Y5X2 465 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 MTORP42345 2549 aa12.01□□□□□ -0.49
NUDCD3-201ENST00000338427 C2CD3Q4AC94 2353 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 ALG1L2C9J202 215 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 CASKO14936 926 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 CXCL13O43927 109 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 NTN1O95631 604 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 C6orf47O95873 294 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 BPGMP07738 259 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 NUDT17P0C025 328 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 NEFHP12036 1026 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 SHC1P29353 583 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 CD79BP40259 229 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 EIF1AXP47813 144 aaKnown RBP12□□□□□ -0.49
NUDCD3-201ENST00000338427 PSMD4P55036 377 aaKnown RBP12□□□□□ -0.49
NUDCD3-201ENST00000338427 IFFO1Q0D2I5 559 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 KEAP1Q14145 624 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 CPEB4Q17RY0 729 aaKnown RBP eCLIP12□□□□□ -0.49
NUDCD3-201ENST00000338427 EXOC3L2Q2M3D2 409 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 NDUFAF6Q330K2 333 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 GLYR1Q49A26 553 aaPredicted RBP12□□□□□ -0.49
NUDCD3-201ENST00000338427 XKR7Q5GH72 579 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 PAMR1Q6UXH9 720 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 RNF165Q6ZSG1 346 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 COX18Q8N8Q8 333 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 WFDC11Q8NEX6 87 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 OR6Y1Q8NGX8 325 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 AENQ8WTP8 325 aaKnown RBP12□□□□□ -0.49
NUDCD3-201ENST00000338427 RNF122Q9H9V4 155 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 MED17Q9NVC6 651 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 NDRG3Q9UGV2 375 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 AP4B1Q9Y6B7 739 aa12□□□□□ -0.49
NUDCD3-201ENST00000338427 PRR14LQ5THK1 2151 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 TTC36A6NLP5 189 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 DEFB108AA8MXU0 73 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 TNFSF11O14788 317 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 SCAMP2O15127 329 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 TYROBPO43914 113 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 RAF1P04049 648 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 IFI6P09912 130 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 G6PDP11413 515 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 CD53P19397 219 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 PSMA4P25789 261 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 ETV4P43268 484 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 ASMTP46597 345 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 CCT3P49368 545 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 PRIM2P49643 509 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 CASP9P55211 416 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 EEFSECP57772 596 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 POU6F2P78424 691 aaPredicted RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 GANABQ14697 944 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms