RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CCL4L1Q8NHW4 92 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 GAB3Q8WWW8 586 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 RSPRY1Q96DX4 576 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 C14orf119Q9NWQ9 140 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 ING4Q9UNL4 249 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 ERVK-19Q9WJR5 959 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 SLC35F4A4IF30 521 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 SYT5O00445 386 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 TRMT12Q53H54 448 aaKnown RBP5.9□□□□□ -1.47
PRKDC-202ENST00000338368 WACQ9BTA9 647 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 STUB1Q9UNE7 303 aa5.9□□□□□ -1.47
PRKDC-202ENST00000338368 SCO2O43819 266 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 JUNBP17275 347 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 S100A1P23297 94 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PYCR1P32322 319 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 GNALP38405 381 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SERTAD2Q14140 314 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 GDPGP1Q6ZNW5 385 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TMEM179BQ7Z7N9 219 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PRR22Q8IZ63 422 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 FAM174AQ8TBP5 190 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SLC37A2Q8TED4 501 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 NSMAFQ92636 917 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 BRD7Q9NPI1 651 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 USP36Q9P275 1121 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 HEMK1Q9Y5R4 338 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 CDH10Q9Y6N8 788 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 A0A1B0GVG6 124 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 A0A1W2PRG6 482 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 MAGEB3O15480 346 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 CASRP41180 1078 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 XCR1P46094 333 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 NR0B1P51843 470 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PLEKHG7Q6ZR37 379 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 IGFN1Q86VF2 1251 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 C1orf216Q8TAB5 229 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TMEM163Q8TC26 289 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 RBP7Q96R05 134 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PTGES2Q9H7Z7 377 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 POLE4Q9NR33 117 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF222Q9UK12 451 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 CD8B2A6NJW9 211 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 CLDN24A6NM45 220 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 HMGN4O00479 90 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 LAMTOR5O43504 91 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PLRG1O43660 514 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 CD8BP10966 210 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SPCS2Q15005 226 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF181Q2M3W8 571 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 LINGO2Q7L985 606 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SNX29P2Q8IUI4 249 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 MS4A15Q8N5U1 240 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 YIPF7Q8N8F6 280 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 RSC1A1Q92681 617 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 MUL1Q969V5 352 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TBC1D20Q96BZ9 403 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 GPER1Q99527 375 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 RLIMQ9NVW2 624 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 INTS1Q8N201 2190 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TLX3O43711 291 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PRAMEF4O60810 478 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 CSF2P04141 144 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 RAB38P57729 211 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PGGHGQ32M88 737 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 MRPL2Q5T653 305 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PRAMEF9Q5VWM5 478 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SAXO2Q658L1 398 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 DNM1P34Q6PK57 102 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 GPALPP1Q8IXQ4 340 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 JSRP1Q96MG2 331 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 HOXD1Q9GZZ0 328 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ACER3Q9NUN7 267 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 KCMF1Q9P0J7 381 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF443Q9Y2A4 671 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PCDHGA6Q9Y5G7 932 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TSC2P49815 1807 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ISPDA4D126 451 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 CTNSO60931 367 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ULK3Q6PHR2 472 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TCTN2Q96GX1 697 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PRRG4Q9BZD6 226 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TTYH1Q9H313 450 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 DDX31Q9H8H2 851 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SMURF1Q9HCE7 757 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 VNN3Q9NY84 501 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PSKH1P11801 424 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 FUT1P19526 365 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TRIM23P36406 574 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ACVR1BP36896 505 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 DNASE1L1P49184 302 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ACY1Q03154 408 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 FCRLBQ6BAA4 426 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 C19orf47Q8N9M1 422 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ITFG2Q969R8 447 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 CCDC32Q9BV29 185 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 DUSP21Q9H596 190 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ELAVL4P26378 380 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 MAP3K8P41279 467 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SOX2P48431 317 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TCTN3Q6NUS6 607 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms