RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TMEM114B3SHH9 223 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 B4DXG7 233 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 H0YC42 278 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 SCDO00767 359 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 SMPD2O60906 423 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 NKX2-2O95096 273 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 HSPA4LO95757 839 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 SHBGP04278 402 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 ALOX5P09917 674 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 LINC00032P0C843 101 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 CD53P19397 219 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 FPR1P21462 350 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 TBXA2RP21731 343 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 ME2P23368 584 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 HOXC12P31275 282 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 PRIM2P49643 509 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 ZNF41P51814 821 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 TPD52P55327 224 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 RPL38P63173 70 aaKnown RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 EXOC3L2Q2M3D2 409 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 GALNTL6Q49A17 601 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 RFTN2Q52LD8 501 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 PDSS1Q5T2R2 415 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 GTF2IRD2BQ6EKJ0 949 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 ZCCHC12Q6PEW1 402 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 ZNF474Q6S9Z5 364 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 LRIG3Q6UXM1 1119 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 SH2D5Q6ZV89 423 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 FAM214BQ7L5A3 538 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 GTF2IRD2Q86UP8 949 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 C10orf107Q8IVU9 208 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 DDIASQ8IXT1 998 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 GSPT2Q8IYD1 628 aaKnown RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 MTERF3Q96E29 417 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 ZC3HAV1LQ96H79 300 aaKnown RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 POM121Q96HA1 1249 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 REXO5Q96IC2 774 aaKnown RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 C18orf12Q96KH6 178 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 TSSK3Q96PN8 268 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 RTN4RQ9BZR6 473 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 KLHL4Q9C0H6 718 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 GSX1Q9H4S2 264 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 UBQLN4Q9NRR5 601 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 ACSS1Q9NUB1 689 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 BAIAP2L1Q9UHR4 511 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 MCTS1Q9ULC4 181 aaKnown RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 CCL27Q9Y4X3 112 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 PCNX3Q9H6A9 2034 aa9.59□□□□□ -0.87
CAPN3-202ENST00000337571 ZNF469Q96JG9 3925 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-202ENST00000337571 AKAP6Q13023 2319 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 IGLV3-32A0A0A0MS00 114 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 ALG1L2C9J202 215 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 NPIPB8E9PQR5 432 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 TBX19O60806 448 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 IGKV1D-16P01601 117 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 NGFRP08138 427 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 ZNF17P17021 662 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 CRYGSP22914 178 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 MAPK1P28482 360 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 LCN1P31025 176 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 HPCAL1P37235 193 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 RPL3P39023 403 aaKnown RBP9.58□□□□□ -0.88
CAPN3-202ENST00000337571 LAPTM4AQ15012 233 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 ACKR1Q16570 336 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 CPTPQ5TA50 214 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 FIGNL1Q6PIW4 674 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 APOOLQ6UXV4 268 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 Q6ZSR9 355 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 GALNT10Q86SR1 603 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 STK32CQ86UX6 486 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 MISPQ8IVT2 679 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 C4orf33Q8N1A6 199 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 METTL25Q8N6Q8 603 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 COX18Q8N8Q8 333 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 SLC16A11Q8NCK7 471 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 WFDC11Q8NEX6 87 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 OR4C3Q8NH37 302 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 CLHC1Q8NHS4 586 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 ACTRT2Q8TDY3 377 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 EPS8L3Q8TE67 593 aaKnown RBP9.58□□□□□ -0.88
CAPN3-202ENST00000337571 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.58□□□□□ -0.88
CAPN3-202ENST00000337571 JADE3Q92613 823 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 ZBTB8AQ96BR9 441 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 ZNF764Q96H86 408 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-202ENST00000337571 MS4A4EQ96PG1 132 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 PRPF18Q99633 342 aaKnown RBP9.58□□□□□ -0.88
CAPN3-202ENST00000337571 PIP5K1AQ99755 562 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 GATA5Q9BWX5 397 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-202ENST00000337571 C12orf65Q9H3J6 166 aaKnown RBP9.58□□□□□ -0.88
CAPN3-202ENST00000337571 ZNF395Q9H8N7 513 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-202ENST00000337571 UBTD1Q9HAC8 227 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 TNFRSF12AQ9NP84 129 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 PLSCR4Q9NRQ2 329 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 GLRX2Q9NS18 164 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 TRAF6Q9Y4K3 522 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 SNX8Q9Y5X2 465 aa9.58□□□□□ -0.88
CAPN3-202ENST00000337571 A0A1W2PRB8 838 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 FAM171A2A8MVW0 826 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 SHISA8B8ZZ34 492 aa9.57□□□□□ -0.88
CAPN3-202ENST00000337571 H3BNH8 94 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms