RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 EFHD2Q96C19 240 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-201ENST00000336180 LGALS12Q96DT0 336 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 RBM18Q96H35 190 aaKnown RBP11.69□□□□□ -0.54
LIMK1-201ENST00000336180 PINK1Q9BXM7 581 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 FLRT3Q9NZU0 649 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 A0A1W2PR77 199 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 ARHGAP33O14559 1287 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF10P21506 573 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-201ENST00000336180 IDUAP35475 653 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 MXD1Q05195 221 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF91Q05481 1191 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 ELOCQ15369 112 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 IGFN1Q86VF2 1251 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 TRNT1Q96Q11 434 aaKnown RBP11.69□□□□□ -0.54
LIMK1-201ENST00000336180 C6orf62Q9GZU0 229 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-201ENST00000336180 BCL2L10Q9HD36 194 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 TOR4AQ9NXH8 423 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 MGAT4BQ9UQ53 548 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 SLC35F4A4IF30 521 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 GIPRP48546 466 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 ANXA11P50995 505 aaKnown RBP11.68□□□□□ -0.54
LIMK1-201ENST00000336180 SLC16A1P53985 500 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 MGAT2Q10469 447 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 FLYWCH1Q4VC44 716 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 POMZP3Q6PJE2 187 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 RFPL4BQ6ZWI9 263 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 LHFPL3Q86UP9 236 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 SVOPQ8N4V2 548 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 DIO2Q92813 273 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 RIT1Q92963 219 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 MYDGFQ969H8 173 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 ZHX1-C8orf76Q96EF9 292 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 SAMD8Q96LT4 415 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 NELL2Q99435 816 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 KLHDC3Q9BQ90 382 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 SPATA5L1Q9BVQ7 753 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 ITPAQ9BY32 194 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 SAP130Q9H0E3 1048 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 ZSCAN32Q9NX65 697 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 KLHL28Q9NXS3 571 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 TRAV27A0A087WT01 109 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 A0A1W2PRQ8 180 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 HYKKA2RU49 373 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 NME1P15531 152 aaKnown RBP11.68□□□□□ -0.54
LIMK1-201ENST00000336180 HOXB6P17509 224 aaKnown RBP11.68□□□□□ -0.54
LIMK1-201ENST00000336180 PLAURQ03405 335 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 LPAL2Q16609 132 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 VWA2Q5GFL6 755 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 SYT6Q5T7P8 510 aaPredicted RBP11.68□□□□□ -0.54
LIMK1-201ENST00000336180 RASSF5Q8WWW0 418 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 POP5Q969H6 163 aaKnown RBP11.68□□□□□ -0.54
LIMK1-201ENST00000336180 TP53INP1Q96A56 240 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 SLC2A4RGQ9NR83 387 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 C19orf53Q9UNZ5 99 aaPredicted RBP11.68□□□□□ -0.54
LIMK1-201ENST00000336180 ENTPD2Q9Y5L3 495 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 LRP4O75096 1905 aa11.68□□□□□ -0.54
LIMK1-201ENST00000336180 CACNA1EQ15878 2313 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 TMEM150CB9EJG8 249 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CAPZBP47756 277 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CCR4P51679 360 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 ELOAQ14241 798 aaKnown RBP11.67□□□□□ -0.54
LIMK1-201ENST00000336180 FHL5Q5TD97 284 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 ALDH16A1Q8IZ83 802 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 DTX3Q8N9I9 347 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 OR4F15Q8NGB8 312 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 OR4Q3Q8NH05 313 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 OR8D2Q9GZM6 311 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 NECTIN3Q9NQS3 549 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 HSPE1-MOB4S4R3N1 261 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CPED1A4D0V7 1026 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 OR5K4A6NMS3 321 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CDK2AP1O14519 115 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 GDF9O60383 454 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 DPM1O60762 260 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF217O75362 1048 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CLPXO76031 633 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 DHPSP49366 369 aaPredicted RBP11.67□□□□□ -0.54
LIMK1-201ENST00000336180 ARL4DP49703 201 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CXCR4P61073 352 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CFHR1Q03591 330 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 LIPKQ5VXJ0 399 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 ALKBH2Q6NS38 261 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CYB561A3Q8NBI2 242 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 KCNS3Q9BQ31 491 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 FUZQ9BT04 418 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 DCSTAMPQ9H295 470 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 CACYBPQ9HB71 228 aaKnown RBP11.67□□□□□ -0.54
LIMK1-201ENST00000336180 PRTFDC1Q9NRG1 225 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 TBC1D23Q9NUY8 699 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 FKBP14Q9NWM8 211 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 ACAD8Q9UKU7 415 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 OR10H1Q9Y4A9 318 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 IGHV3-20A0A0C4DH32 117 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 GYPBP06028 91 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 S100A5P33763 92 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 SLC9A3P48764 834 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF136P52737 540 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 C21orf59P57076 290 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 PSG6Q00889 435 aa11.67□□□□□ -0.54
LIMK1-201ENST00000336180 ILKQ13418 452 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms