RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PRDX1Q06830 199 aaKnown RBP13□□□□□ -0.33
SF1-202ENST00000334944 KLHL22Q53GT1 634 aa13□□□□□ -0.33
SF1-202ENST00000334944 CCNJQ5T5M9 372 aa13□□□□□ -0.33
SF1-202ENST00000334944 MZT2BQ6NZ67 158 aa13□□□□□ -0.33
SF1-202ENST00000334944 TMEM107Q6UX40 140 aa13□□□□□ -0.33
SF1-202ENST00000334944 FAM92BQ6ZTR7 304 aa13□□□□□ -0.33
SF1-202ENST00000334944 LRRC17Q8N6Y2 441 aa13□□□□□ -0.33
SF1-202ENST00000334944 ZG16BQ96DA0 208 aa13□□□□□ -0.33
SF1-202ENST00000334944 CRELD1Q96HD1 420 aa13□□□□□ -0.33
SF1-202ENST00000334944 BBS4Q96RK4 519 aa13□□□□□ -0.33
SF1-202ENST00000334944 TAPBPLQ9BX59 468 aa13□□□□□ -0.33
SF1-202ENST00000334944 HDHD2Q9H0R4 259 aa13□□□□□ -0.33
SF1-202ENST00000334944 IFT22Q9H7X7 185 aa13□□□□□ -0.33
SF1-202ENST00000334944 SFXN1Q9H9B4 322 aa13□□□□□ -0.33
SF1-202ENST00000334944 ALPK3Q96L96 1907 aa13□□□□□ -0.33
SF1-202ENST00000334944 POM121BA6NF01 834 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 OR5K4A6NMS3 321 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 ZNF670-ZNF695F2Z2N8 137 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 ENTPD6O75354 484 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 PAHP00439 452 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 CEACAM5P06731 702 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 TPOP07202 933 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 GABRB1P18505 474 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 NUP62P37198 522 aaPredicted RBP12.99□□□□□ -0.33
SF1-202ENST00000334944 TFF2Q03403 129 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 MS4A15Q8N5U1 240 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 FRMD1Q8N878 549 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 SLC7A13Q8TCU3 470 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 TEX101Q9BY14 249 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 C6orf106Q9H6K1 298 aaPredicted RBP12.99□□□□□ -0.33
SF1-202ENST00000334944 FGF22Q9HCT0 170 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 SLC6A20Q9NP91 592 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 MRPS30Q9NP92 439 aaKnown RBP12.99□□□□□ -0.33
SF1-202ENST00000334944 UBQLN2Q9UHD9 624 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 SSR3Q9UNL2 185 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 NCKAP1Q9Y2A7 1128 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 A0A1W2PPL8 197 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 A0A1W2PR48 441 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 ERGP11308 486 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 BUD31P41223 144 aaPredicted RBP12.99□□□□□ -0.33
SF1-202ENST00000334944 LIMS1P48059 325 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 RAB28P51157 221 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 CRISP1P54107 249 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 SPHARQ15513 63 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 OR8K3Q8NH51 312 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 OR52P1PQ8NH57 321 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 PHOSPHO2Q8TCD6 241 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 RAB7BQ96AH8 199 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 ARSGQ96EG1 525 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 CXorf58Q96LI9 332 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 AMDHD1Q96NU7 426 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 WDFY2Q96P53 400 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 PELI2Q9HAT8 420 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 TXNL4BQ9NX01 149 aaKnown RBP12.99□□□□□ -0.33
SF1-202ENST00000334944 ICKQ9UPZ9 632 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 PPP2CBP62714 309 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 PPP2CAP67775 309 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 C19orf48Q6RUI8 117 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 KCT2Q8NC54 265 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 APOBEC4Q8WW27 367 aaKnown RBP12.99□□□□□ -0.33
SF1-202ENST00000334944 KAT2AQ92830 837 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 COL26A1Q96A83 441 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 C1GALT1C1Q96EU7 318 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 C12orf57Q99622 126 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 RSPH9Q9H1X1 276 aaPredicted RBP12.99□□□□□ -0.33
SF1-202ENST00000334944 PHPT1Q9NRX4 125 aaPredicted RBP12.99□□□□□ -0.33
SF1-202ENST00000334944 SPATA2Q9UM82 520 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 ZNF175Q9Y473 711 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 KCNMB2Q9Y691 235 aa12.99□□□□□ -0.33
SF1-202ENST00000334944 MUC22E2RYF6 1773 aaPredicted RBP12.99□□□□□ -0.33
SF1-202ENST00000334944 SPTBP11277 2137 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 E9PQ18 207 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 LANCL1O43813 399 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 APODP05090 189 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 HMGN2P05204 90 aaKnown RBP12.98□□□□□ -0.33
SF1-202ENST00000334944 GLAP06280 429 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 FAM157BP0CG42 384 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 POU3F2P20265 443 aaPredicted RBP12.98□□□□□ -0.33
SF1-202ENST00000334944 ELAVL4P26378 380 aaKnown RBP12.98□□□□□ -0.33
SF1-202ENST00000334944 IGFALSP35858 605 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 CDC42P60953 191 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 LTB4RQ15722 352 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 DUSP6Q16828 381 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 PLAG1Q6DJT9 500 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 ZNF770Q6IQ21 691 aaPredicted RBP12.98□□□□□ -0.33
SF1-202ENST00000334944 RASSF6Q6ZTQ3 369 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 ADGRG3Q86Y34 549 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 GHDCQ8N2G8 530 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 SLC25A46Q96AG3 418 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 CNRIP1Q96F85 164 aaPredicted RBP12.98□□□□□ -0.33
SF1-202ENST00000334944 SLC35G5Q96KT7 338 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 SORCS2Q96PQ0 1159 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 ARHGEF17Q96PE2 2063 aaPredicted RBP12.98□□□□□ -0.33
SF1-202ENST00000334944 COL4A3Q01955 1670 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 DPM1O60762 260 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 SCG5P05408 212 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 ELOAQ14241 798 aaKnown RBP12.98□□□□□ -0.33
SF1-202ENST00000334944 ARHGAP19Q14CB8 494 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 DCST1Q5T197 706 aa12.98□□□□□ -0.33
SF1-202ENST00000334944 OR4N5Q8IXE1 308 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms