RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TNFSF14O43557 240 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 AKAP8O43823 692 aaKnown RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 TMCC2O75069 709 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 APBB3O95704 486 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 CELP19835 753 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 NKX2-5P52952 324 aaPredicted RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 LBX1P52954 281 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 SRP54P61011 504 aaKnown RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 ALG11Q2TAA5 492 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 MRPL2Q5T653 305 aaKnown RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 AGAP6Q5VW22 663 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 CPOQ8IVL8 374 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 ZNF619Q8N2I2 560 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 TOR1AIP2Q8NFQ8 470 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 FANK1Q8TC84 345 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 AGAP4Q96P64 663 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 NEDD4LQ96PU5 975 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 SECISBP2Q96T21 854 aaKnown RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 MED18Q9BUE0 208 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 PIGUQ9H490 435 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 HINT3Q9NQE9 182 aaKnown RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 POU2F3Q9UKI9 436 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 C19orf53Q9UNZ5 99 aaPredicted RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 SPACA6W5XKT8 324 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 TRAPPC13A5PLN9 417 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 H0YGG7 62 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 PEX12O00623 359 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 FGF17O60258 216 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 STX11O75558 287 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 CCNKO75909 580 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 THBS1P07996 1170 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 FUT1P19526 365 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 HTR1FP30939 366 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 ARF3P61204 181 aaPredicted RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 SHC2P98077 582 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 TFF2Q03403 129 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 PDZK1Q5T2W1 519 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 NXNL2Q5VZ03 156 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 SMARCD3Q6STE5 483 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 B3GLCTQ6Y288 498 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 ZNF517Q6ZMY9 492 aaPredicted RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 CXXC5Q7LFL8 322 aaKnown RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 ZNF485Q8NCK3 441 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 OR5T3Q8NGG3 340 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 FAM3CQ92520 227 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 UBQLN3Q9H347 655 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 CBLCQ9ULV8 474 aa16.48■□□□□ 0.23
LRCH3-201ENST00000334859 RBMX2Q9Y388 322 aaKnown RBP16.48■□□□□ 0.23
LRCH3-201ENST00000334859 UNC119BA6NIH7 251 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 CHST10O43529 356 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 HMGN1P05114 100 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 DBIP07108 87 aaKnown RBP16.47■□□□□ 0.23
LRCH3-201ENST00000334859 HTR2AP28223 471 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 SCN1BQ07699 218 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 ILF3Q12906 894 aaKnown RBP eCLIP16.47■□□□□ 0.235e-7■■■□□ 19.1
LRCH3-201ENST00000334859 RSBN1Q5VWQ0 802 aaPredicted RBP16.47■□□□□ 0.23
LRCH3-201ENST00000334859 PLBD1Q6P4A8 553 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 FIGNL1Q6PIW4 674 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 GALNT6Q8NCL4 622 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 OR52L1Q8NGH7 329 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 OR51G2Q8NGK0 314 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 ARSGQ96EG1 525 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 DCLRE1CQ96SD1 692 aaKnown RBP16.47■□□□□ 0.23
LRCH3-201ENST00000334859 HDHD5Q9BXW7 423 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 OR52D1Q9H346 318 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 CAPN10Q9HC96 672 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 FBXO34Q9NWN3 711 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 TNFRSF10DQ9UBN6 386 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 PILRAQ9UKJ1 303 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 PCDHGB2Q9Y5G2 931 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 SPTBN5Q9NRC6 3674 aaKnown RBP16.47■□□□□ 0.23
LRCH3-201ENST00000334859 RFX2P48378 723 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 RFX3P48380 749 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 EXOSC7Q15024 291 aaKnown RBP16.47■□□□□ 0.23
LRCH3-201ENST00000334859 GLYR1Q49A26 553 aaPredicted RBP16.47■□□□□ 0.23
LRCH3-201ENST00000334859 TMEM184AQ6ZMB5 413 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 WDR88Q6ZMY6 472 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 SIRT6Q8N6T7 355 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 TMEM52Q8NDY8 209 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 PFN4Q8NHR9 129 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 SPRYD4Q8WW59 207 aaPredicted RBP16.47■□□□□ 0.23
LRCH3-201ENST00000334859 EVA1BQ9NVM1 165 aa16.47■□□□□ 0.23
LRCH3-201ENST00000334859 SYNDIG1LA6NDD5 238 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 IFI30P13284 250 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 FGF9P31371 208 aaPredicted RBP16.46■□□□□ 0.23
LRCH3-201ENST00000334859 SSTR4P31391 388 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 ZNF155Q12901 538 aaPredicted RBP16.46■□□□□ 0.23
LRCH3-201ENST00000334859 PYDC2Q56P42 97 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 FHL5Q5TD97 284 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 XKRXQ6PP77 449 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 CD200R1LQ6Q8B3 271 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 MRPL38Q96DV4 380 aaKnown RBP16.46■□□□□ 0.23
LRCH3-201ENST00000334859 PRSS27Q9BQR3 290 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 LYRM4Q9HD34 91 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 COMMD3Q9UBI1 195 aa16.46■□□□□ 0.23
LRCH3-201ENST00000334859 TRDV1A0A1B0GX56 115 aa16.45■□□□□ 0.22
LRCH3-201ENST00000334859 TFECO14948 347 aaPredicted RBP16.45■□□□□ 0.22
LRCH3-201ENST00000334859 IGHA1P01876 353 aa16.45■□□□□ 0.22
LRCH3-201ENST00000334859 ATP1B1P05026 303 aa16.45■□□□□ 0.22
LRCH3-201ENST00000334859 ZGLP1P0C6A0 271 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms