RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 TUBAL3A6NHL2 446 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 A6NNC1 897 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 ALG1L2C9J202 215 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 H0YC42 278 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 LINC01387J3KSC0 135 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 RGS16O15492 202 aaPredicted RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 ITM2AO43736 263 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 SKAP2O75563 359 aaPredicted RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 LYPLA1O75608 230 aaPredicted RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 TNFSF13O75888 250 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 HMGN2P05204 90 aaKnown RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 NGFRP08138 427 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 ALOX5P09917 674 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 DDX5P17844 614 aaKnown RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 TBXA2RP21731 343 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 RPL3P39023 403 aaKnown RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 MMP16P51512 607 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 SUCLG1P53597 346 aaKnown RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 DIO3P55073 304 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 TPD52P55327 224 aaPredicted RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 TMEM44Q2T9K0 475 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 KRT71Q3SY84 523 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 RAET1LQ5VY80 246 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 FIGNL1Q6PIW4 674 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 SZRD1Q7Z422 152 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 GRAMD2AQ8IUY3 354 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 RIMKLAQ8IXN7 391 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 UBQLNLQ8IYU4 475 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 GCNT2Q8N0V5 402 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 MEIOBQ8N635 442 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 KRTCAP2Q8N6L1 136 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 FNDC5Q8NAU1 212 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 PSMA8Q8TAA3 256 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 LINC01560Q8TB33 94 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 OR5P2Q8WZ92 322 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 TUBGCP3Q96CW5 907 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 COQ8BQ96D53 544 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 PIGQQ9BRB3 760 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 GPATCH1Q9BRR8 931 aaKnown RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 POLDIP3Q9BY77 421 aaKnown RBP10.12□□□□□ -0.79
C9orf85-201ENST00000334731 RAB21Q9UL25 225 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 MED12Q93074 2177 aa10.12□□□□□ -0.79
C9orf85-201ENST00000334731 ANKHD1Q8IWZ3 2542 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 A0A1W2PNV4 684 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 WDR91A4D1P6 747 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 SLC22A20A6NK97 555 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 A8MXE2 369 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 BIRC5O15392 142 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 NDUFB5O43674 189 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 GMFGO60234 142 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 TNFRSF21O75509 655 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 OXSR1O95747 527 aaPredicted RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 HSPA4LO95757 839 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 SERPINE1P05121 402 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 CRHP06850 196 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 DHRS4L1P0CG22 281 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 EPXP11678 715 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 PRPS1L1P21108 318 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 LCN1P31025 176 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 DNAJA1P31689 397 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 CCT3P49368 545 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 PRIM2P49643 509 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 CLDN20P56880 219 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 EEFSECP57772 596 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 EEF1A1P68104 462 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 SORDQ00796 357 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 EMX2Q04743 252 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 MPP2Q14168 576 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 LASP1Q14847 261 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 CHI3L2Q15782 390 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 TNFAIP8L3Q5GJ75 292 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 EEF1A1P5Q5VTE0 462 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 SPNS3Q6ZMD2 512 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 CHMP1BQ7LBR1 199 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 LUZP2Q86TE4 346 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 NATD1Q8N6N6 113 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 COX18Q8N8Q8 333 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 PPP1R14CQ8TAE6 165 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 FIG4Q92562 907 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 JADE3Q92613 823 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 STARD4Q96DR4 205 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 OTUB1Q96FW1 271 aaPredicted RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 MYCBPQ99417 103 aaPredicted RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 STACQ99469 402 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 PRPF18Q99633 342 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 RBM24Q9BX46 236 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 BTBD2Q9BX70 525 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 C20orf27Q9GZN8 174 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 CLEC4MQ9H2X3 399 aaPredicted RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 PIGMQ9H3S5 423 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 PIGUQ9H490 435 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 SSU72Q9NP77 194 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 UBQLN4Q9NRR5 601 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 ZCCHC3Q9NUD5 404 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 GIN1Q9NXP7 522 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 EIF3LQ9Y262 564 aaKnown RBP10.11□□□□□ -0.79
C9orf85-201ENST00000334731 SNX8Q9Y5X2 465 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 AP4B1Q9Y6B7 739 aa10.11□□□□□ -0.79
C9orf85-201ENST00000334731 KIAA1549Q9HCM3 1950 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms