RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 SLC25A12O75746 678 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 SP1P08047 785 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 NCK1P16333 377 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 GGT1P19440 569 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 EVI2BP34910 448 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 PGM1P36871 562 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 HPCAP84074 193 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 MS4A2Q01362 244 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 PDZK1Q5T2W1 519 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 PRAMEF20Q5VT98 475 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 Q6ZS92 163 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 MARCH3Q86UD3 253 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 UTP4Q969X6 686 aaKnown RBP16.02■□□□□ 0.15
CHGA-202ENST00000334654 FRMD6Q96NE9 622 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 ARHGAP9Q9BRR9 750 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 PCDHAC1Q9H158 963 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 GALNT9Q9HCQ5 603 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 TIMMDC1Q9NPL8 285 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 ABCG2Q9UNQ0 655 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 ANGPT4Q9Y264 503 aa16.02■□□□□ 0.15
CHGA-202ENST00000334654 A0A0G2JMM0 328 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 A0A1W2PPB8 328 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 A0A1W2PRS3 328 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 PRAMEF25A6NGN4 478 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 CLDN24A6NM45 220 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 KIR3DP1A8MWS1 328 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 CXCR6O00574 342 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 MFN2O95140 757 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 CNR1P21554 472 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 ME2P23368 584 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 KDELR2P33947 212 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 SNTA1Q13424 505 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 CD226Q15762 336 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 SLC25A25Q6KCM7 469 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 ASB18Q6ZVZ8 466 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 VRK2Q86Y07 508 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 C9orf43Q8TAL5 461 aaPredicted RBP16.01■□□□□ 0.15
CHGA-202ENST00000334654 OIT3Q8WWZ8 545 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 TM9SF4Q92544 642 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 TAMM41Q96BW9 452 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHGA-202ENST00000334654 ZNF71Q9NQZ8 489 aaPredicted RBP16.01■□□□□ 0.15
CHGA-202ENST00000334654 SACM1LQ9NTJ5 587 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 DTNAQ9Y4J8 743 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 PCDHGB6Q9Y5F9 930 aa16.01■□□□□ 0.15
CHGA-202ENST00000334654 IGSF10Q6WRI0 2623 aa16■□□□□ 0.15
CHGA-202ENST00000334654 PINLYPA6NC86 204 aa16■□□□□ 0.15
CHGA-202ENST00000334654 C2orf72A6NCS6 295 aa16■□□□□ 0.15
CHGA-202ENST00000334654 G3V3Y1 287 aa16■□□□□ 0.15
CHGA-202ENST00000334654 NME2P1O60361 137 aa16■□□□□ 0.15
CHGA-202ENST00000334654 TPST1O60507 370 aa16■□□□□ 0.15
CHGA-202ENST00000334654 BCAS1O75363 584 aaPredicted RBP16■□□□□ 0.15
CHGA-202ENST00000334654 EPPINO95925 133 aa16■□□□□ 0.15
CHGA-202ENST00000334654 PABPC4LP0CB38 370 aaKnown RBP16■□□□□ 0.15
CHGA-202ENST00000334654 NME2P22392 152 aa16■□□□□ 0.15
CHGA-202ENST00000334654 ADH7P40394 386 aa16■□□□□ 0.15
CHGA-202ENST00000334654 RNF144AP50876 292 aaPredicted RBP16■□□□□ 0.15
CHGA-202ENST00000334654 TRIM25Q14258 630 aaKnown RBP16■□□□□ 0.15
CHGA-202ENST00000334654 FGFBP1Q14512 234 aa16■□□□□ 0.15
CHGA-202ENST00000334654 INPP5JQ15735 1006 aaPredicted RBP16■□□□□ 0.15
CHGA-202ENST00000334654 ZNF766Q5HY98 468 aa16■□□□□ 0.15
CHGA-202ENST00000334654 INTS11Q5TA45 600 aaKnown RBP16■□□□□ 0.15
CHGA-202ENST00000334654 GLYATQ6IB77 296 aa16■□□□□ 0.15
CHGA-202ENST00000334654 PATL1Q86TB9 770 aaKnown RBP16■□□□□ 0.15
CHGA-202ENST00000334654 COMTD1Q86VU5 262 aa16■□□□□ 0.15
CHGA-202ENST00000334654 ULK2Q8IYT8 1036 aa16■□□□□ 0.15
CHGA-202ENST00000334654 OR52P1PQ8NH57 321 aa16■□□□□ 0.15
CHGA-202ENST00000334654 METTL7AQ9H8H3 244 aa16■□□□□ 0.15
CHGA-202ENST00000334654 KLHL1Q9NR64 748 aa16■□□□□ 0.15
CHGA-202ENST00000334654 KMT2BQ9UMN6 2715 aaPredicted RBP16■□□□□ 0.15
CHGA-202ENST00000334654 BSNQ9UPA5 3926 aa16■□□□□ 0.15
CHGA-202ENST00000334654 PRRC2CQ9Y520 2896 aaKnown RBP15.99■□□□□ 0.15
CHGA-202ENST00000334654 SERINC4A6NH21 518 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 ERVH48-1M5A8F1 160 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 SCDO00767 359 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 ACOT8O14734 319 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 SCO2O43819 266 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 TRIM3O75382 744 aaPredicted RBP15.99■□□□□ 0.15
CHGA-202ENST00000334654 ANGPTL1O95841 491 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 OPN1SWP03999 348 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 P04436 131 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 DBIP07108 87 aaKnown RBP15.99■□□□□ 0.15
CHGA-202ENST00000334654 NID1P14543 1247 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 DNASE1L1P49184 302 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 EEF1A1P68104 462 aaKnown RBP15.99■□□□□ 0.15
CHGA-202ENST00000334654 RPP38P78345 283 aaKnown RBP15.99■□□□□ 0.15
CHGA-202ENST00000334654 KCNJ10P78508 379 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 FOXO1Q12778 655 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 SLC30A6Q6NXT4 461 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 GALNTL5Q7Z4T8 443 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 SULF2Q8IWU5 870 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 PEX5LQ8IYB4 626 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 TNIP2Q8NFZ5 429 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 FIG4Q92562 907 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 ZNF607Q96SK3 696 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 OSBPL11Q9BXB4 747 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 GORASP2Q9H8Y8 452 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 NCKAP5O14513 1909 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 FREM3P0C091 2139 aa15.99■□□□□ 0.15
CHGA-202ENST00000334654 TRAV17A0A0B4J275 112 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms