RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 NHSL2Q5HYW2 709 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 SLC6A19Q695T7 634 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 FCRLBQ6BAA4 426 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 JMJD6Q6NYC1 403 aaPredicted RBP15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 LINC00696Q6ZRV3 163 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 STK32CQ86UX6 486 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 OR4N5Q8IXE1 308 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 OIT3Q8WWZ8 545 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 RIT1Q92963 219 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 BATF3Q9NR55 127 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 PLA2G3Q9NZ20 509 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 ZNF232Q9UNY5 417 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 CFL2Q9Y281 166 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 SLC9A8Q9Y2E8 581 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 HEMK1Q9Y5R4 338 aaPredicted RBP15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 ENPP4Q9Y6X5 453 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 DSPPQ9NZW4 1301 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 TCRBV16S1A1N1A0A5B0 115 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 TMEM229AB2RXF0 380 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 EI24O14681 340 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 F10P00742 488 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 MT-ND1P03886 318 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 ALPLP05186 524 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 FESP07332 822 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 CDH2P19022 906 aaPredicted RBP15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 CD247P20963 164 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 MAP3K8P41279 467 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 HMGA2P52926 109 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 MRPS35P82673 323 aaKnown RBP15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 ID2Q02363 134 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 TLE1Q04724 770 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 MERTKQ12866 999 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 SYPL1Q16563 259 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 IQCCQ4KMZ1 466 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 GPAT3Q53EU6 434 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 AGAP7PQ5VUJ5 663 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 PAPD4Q6PIY7 484 aaKnown RBP15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 IGFL2Q6UWQ7 119 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 IGFL3Q6UXB1 125 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 DHRSXQ8N5I4 330 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 NFAM1Q8NET5 270 aaPredicted RBP15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 OR5D16Q8NGK9 328 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 TFAP2CQ92754 450 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 ART5Q96L15 291 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 AGAP4Q96P64 663 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 ZNF300Q96RE9 604 aaPredicted RBP15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 ANKRD60Q9BZ19 345 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 KLHL28Q9NXS3 571 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 NDUFAF4Q9P032 175 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 PRODH2Q9UF12 536 aa15.17■□□□□ 0.02
PDLIM1-201ENST00000329399 A0A1W2PS29 197 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 C7orf72A4D263 438 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 PRAMEF2O60811 474 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 RPSAP08865 295 aaKnown RBP15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 PRKAR1BP31321 381 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 PSPHP78330 225 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 BTBD16Q32M84 506 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 TRMT12Q53H54 448 aaKnown RBP15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 TTC23Q5W5X9 447 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 PLAG1Q6DJT9 500 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 DHRS4L2Q6PKH6 230 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 LINC00471Q8N535 108 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 MAGEE2Q8TD90 523 aaPredicted RBP15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 SLC35A4Q96G79 324 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 C16orf58Q96GQ5 468 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 COL21A1Q96P44 957 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 PIP5K1AQ99755 562 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 LMF2Q9BU23 707 aaKnown RBP15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 SAP130Q9H0E3 1048 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 ARMC7Q9H6L4 198 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 PCDHGB7Q9Y5F8 929 aa15.16■□□□□ 0.02
PDLIM1-201ENST00000329399 ARRDC5A6NEK1 342 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 PDLIM1O00151 329 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 STX11O75558 287 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 NKX2-2O95096 273 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 H6PDO95479 791 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 ALPPP05187 535 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 THBS1P07996 1170 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 THRBP10828 461 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 IFNA8P32881 189 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 PPP2R2BQ00005 443 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 FUT7Q11130 342 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 PDK3Q15120 406 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 EIPR1Q53HC9 387 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 FAM111BQ6SJ93 734 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 SLC44A2Q8IWA5 706 aaPredicted RBP15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 PEX5LQ8IYB4 626 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 SLC9A6Q92581 669 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 PSD2Q9BQI7 771 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 ADI1Q9BV57 179 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 POLR2J2Q9GZM3 115 aaKnown RBP15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 POLR2J3Q9H1A7 115 aaKnown RBP15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 EQTNQ9NQ60 294 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 ENOPH1Q9UHY7 261 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 SLC13A4Q9UKG4 626 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 ABCG2Q9UNQ0 655 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 SAMHD1Q9Y3Z3 626 aaKnown RBP15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 USP9XQ93008 2570 aaPredicted RBP15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 SHANK1Q9Y566 2161 aa15.15■□□□□ 0.02
PDLIM1-201ENST00000329399 PRAMEF27A3QJZ7 478 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms