RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TPPPO94811 219 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 SEMG1P04279 462 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 IGKV3-11P04433 115 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 JMJD7P0C870 316 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 RAP2AP10114 183 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 THRBP10828 461 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 ACP2P11117 423 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 CEACAM1P13688 526 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 SSTR4P31391 388 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 CRISP3P54108 245 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF267Q14586 743 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-202ENST00000324340 SYPL1Q16563 259 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 RFX4Q33E94 735 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 FAM98BQ52LJ0 330 aaKnown RBP11.83□□□□□ -0.52
DDX39A-202ENST00000324340 ADCK1Q86TW2 530 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 TMEM151BQ8IW70 566 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 FAM86B1Q8N7N1 296 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF615Q8N8J6 731 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 GALNT6Q8NCL4 622 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 CHDHQ8NE62 594 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-202ENST00000324340 OR14A16Q8NHC5 309 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 ADAMTS15Q8TE58 950 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 DOK4Q8TEW6 326 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 NACC2Q96BF6 587 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 RNF31Q96EP0 1072 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 TRNT1Q96Q11 434 aaKnown RBP11.83□□□□□ -0.52
DDX39A-202ENST00000324340 TREX2Q9BQ50 279 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-202ENST00000324340 BTBD2Q9BX70 525 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 OR10A5Q9H207 317 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 C12orf10Q9HB07 376 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 EQTNQ9NQ60 294 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 EXD2Q9NVH0 621 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 WARS2Q9UGM6 360 aaKnown RBP11.83□□□□□ -0.52
DDX39A-202ENST00000324340 ERVK-19Q9WJR5 959 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 KCNE3Q9Y6H6 103 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 PCNX2A6NKB5 2137 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 KIF26BQ2KJY2 2108 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 SLC28A2O43868 658 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 ALOX12BO75342 701 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 PDE9AO76083 593 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 NKX2-2O95096 273 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 CRYZL1O95825 349 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 DDAH2O95865 285 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 AK1P00568 194 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 IFNA14P01570 189 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 HEXBP07686 556 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 GUSBP08236 651 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 CD63P08962 238 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 NR2F1P10589 423 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 TNNI3P19429 210 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 RYKP34925 604 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 RCVRNP35243 200 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 DEFA1P59665 94 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 DEFA3P59666 94 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 CXCR4P61073 352 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 SELENOWP63302 87 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 DUSP5Q16690 384 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 DUSP7Q16829 419 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 ARHGAP11BQ3KRB8 267 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 AGAP6Q5VW22 663 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 TMEM205Q6UW68 189 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 ENPP6Q6UWR7 440 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 ANKRD37Q7Z713 158 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 TMPRSS12Q86WS5 348 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 LYSMD2Q8IV50 215 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 PRSS58Q8IYP2 241 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 SVOPLQ8N434 492 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 MORN4Q8NDC4 146 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF555Q8NEP9 628 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 BBS10Q8TAM1 723 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 FBXO30Q8TB52 745 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 FAM110BQ8TC76 370 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF721Q8TF20 911 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 FBLIM1Q8WUP2 373 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 CDS1Q92903 461 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 DAZLQ92904 295 aaKnown RBP11.82□□□□□ -0.52
DDX39A-202ENST00000324340 MR1Q95460 341 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 OTUB1Q96FW1 271 aaPredicted RBP11.82□□□□□ -0.52
DDX39A-202ENST00000324340 SENP5Q96HI0 755 aaPredicted RBP11.82□□□□□ -0.52
DDX39A-202ENST00000324340 PYURFQ96I23 114 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 ART5Q96L15 291 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 VSTM2LQ96N03 204 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 AGAP4Q96P64 663 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 DHRS9Q9BPW9 319 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 CNPPD1Q9BV87 410 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 SOX17Q9H6I2 414 aaPredicted RBP11.82□□□□□ -0.52
DDX39A-202ENST00000324340 RUBCNLQ9H714 662 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 FOLH1BQ9HBA9 442 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 CCNB1IP1Q9NPC3 277 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 PNO1Q9NRX1 252 aaKnown RBP11.82□□□□□ -0.52
DDX39A-202ENST00000324340 ADPRHL2Q9NX46 363 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 CALML5Q9NZT1 146 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 DSPPQ9NZW4 1301 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF221Q9UK13 617 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 PPIEQ9UNP9 301 aaKnown RBP11.82□□□□□ -0.52
DDX39A-202ENST00000324340 AURKCQ9UQB9 309 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 PRELID1Q9Y255 219 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 PCDHGB3Q9Y5G1 929 aa11.82□□□□□ -0.52
DDX39A-202ENST00000324340 A0A0G2JPF8 293 aa11.81□□□□□ -0.52
DDX39A-202ENST00000324340 LOC105371267A0A1B0GV96 52 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms