RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 RAB30Q15771 203 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 RAB41Q5JT25 222 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 SHISA6Q6ZSJ9 500 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 OR1J4Q8NGS1 313 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 THAP7Q9BT49 309 aaPredicted RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 PRSS51A0A1B0GVH4 220 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 DVL2O14641 736 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TP53I11O14683 189 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CRHBPP24387 322 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TMEM115Q12893 351 aaPredicted RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 TPGS2Q68CL5 300 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 APOOLQ6UXV4 268 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TEX26Q8N6G2 289 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ZBTB44Q8NCP5 570 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CREB3L4Q8TEY5 395 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 C20orf24Q9BUV8 137 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 KCNIP1Q9NZI2 227 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TMEM181Q9P2C4 612 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 NAV1Q8NEY1 1877 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 DOK2O60496 412 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CLN5O75503 358 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CBSLP0DN79 551 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 SHMT2P34897 504 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CBSP35520 551 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ATP4BP51164 291 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 PSPHP78330 225 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 DPPA2Q7Z7J5 298 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 SVBPQ8N300 66 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 NETO1Q8TDF5 533 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 NTAN1Q96AB6 310 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CCNL2Q96S94 520 aaPredicted RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 OR1A2Q9Y585 309 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 IER3IP1Q9Y5U9 82 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 UBBP0CG47 229 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 UBCP0CG48 685 aaKnown RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 RPS27AP62979 156 aaKnown RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 UBA52P62987 128 aaKnown RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 SLC25A11Q02978 314 aaKnown RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 TNK1Q13470 666 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 IER5LQ5T953 404 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CELF2-AS1Q8N7Q2 184 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 GDPD1Q8N9F7 314 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CMASQ8NFW8 434 aaPredicted RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 OR9K2Q8NGE7 335 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 PELOQ9BRX2 385 aaKnown RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 ACKR4Q9NPB9 350 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 STARD5Q9NSY2 213 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TAS2R16Q9NYV7 291 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 KIDINS220Q9ULH0 1771 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 FRS3O43559 492 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 LILRB3O75022 631 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 SPOCK1Q08629 439 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CDK5R2Q13319 367 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 METTL11BQ5VVY1 283 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 OCSTAMPQ9BR26 566 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 FAM234AQ9H0X4 552 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TMEM59LQ9UK28 342 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 FCER1GP30273 86 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TATDN3Q17R31 274 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ETFRF1Q6IPR1 90 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 IDO2Q6ZQW0 420 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 PRR22Q8IZ63 422 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 SLC35B2Q8TB61 432 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ACDQ96AP0 544 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 NXF5Q9H1B4 397 aaKnown RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 NOX3Q9HBY0 568 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TMPRSS11EQ9UL52 423 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 KLF11O14901 512 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 CCL5P13501 91 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 RFC2P35250 354 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 HNF1BP35680 557 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 EMP3P54852 163 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 LRIF1Q5T3J3 769 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 SLC18B1Q6NT16 456 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ENTHD1Q8IYW4 607 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TMEM130Q8N3G9 435 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 DIO2Q92813 273 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 SUSD3Q96L08 255 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ACTR6Q9GZN1 396 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 UNKLQ9H9P5 680 aaKnown RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 MED13Q9UHV7 2174 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 KIAA1217Q5T5P2 1943 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 H3BML4 177 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ZIC2O95409 532 aaPredicted RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 CD1DP15813 335 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 SLC11A1P49279 550 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 VEGFCP49767 419 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 HABP2Q14520 560 aaPredicted RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 TSPAN11A1L157 253 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 NPBWR1P48145 328 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 LTC4SQ16873 150 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 OR52E8Q6IFG1 317 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ZNF836Q6ZNA1 936 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 KBTBD6Q86V97 674 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 FJX1Q86VR8 437 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 TMEM173Q86WV6 379 aaPredicted RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 IFNL1Q8IU54 200 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ADGRF3Q8IZF5 1079 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 OR8J3Q8NGG0 315 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 DMAC2Q9NW81 257 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms