RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CLDN6P56747 220 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 MAD2L1BPQ15013 274 aaPredicted RBP17.01■□□□□ 0.31
USP39-201ENST00000323701 C9orf40Q8IXQ3 194 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 PARP8Q8N3A8 854 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 OR7G1Q8NGA0 311 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 LOXL4Q96JB6 756 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 RNF6Q9Y252 685 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 SLC1A7O00341 560 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 ADAP00813 363 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 ZNF883P0CG24 379 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 CSTF2P33240 577 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP39-201ENST00000323701 GGT2P36268 569 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 SMIM11AP58511 58 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 BIKQ13323 160 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 NDUFAF6Q330K2 333 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 WDR88Q6ZMY6 472 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 PLEKHM3Q6ZWE6 761 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 BPIFB6Q8NFQ5 453 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 ADIPOR1Q96A54 375 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 POLE3Q9NRF9 147 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 PCDHGA5Q9Y5G8 931 aa17.01■□□□□ 0.31
USP39-201ENST00000323701 DMXL1Q9Y485 3027 aa17■□□□□ 0.31
USP39-201ENST00000323701 AP3D1O14617 1153 aa17■□□□□ 0.31
USP39-201ENST00000323701 OXSR1O95747 527 aaPredicted RBP17■□□□□ 0.31
USP39-201ENST00000323701 ACP1P24666 158 aa17■□□□□ 0.31
USP39-201ENST00000323701 POU1F1P28069 291 aa17■□□□□ 0.31
USP39-201ENST00000323701 IDH2P48735 452 aaKnown RBP17■□□□□ 0.31
USP39-201ENST00000323701 HLCSP50747 726 aa17■□□□□ 0.31
USP39-201ENST00000323701 DCDP81605 110 aaKnown RBP17■□□□□ 0.31
USP39-201ENST00000323701 RBM44Q6ZP01 1051 aaKnown RBP17■□□□□ 0.31
USP39-201ENST00000323701 PRICKLE2Q7Z3G6 844 aa17■□□□□ 0.31
USP39-201ENST00000323701 CCDC103Q8IW40 242 aa17■□□□□ 0.31
USP39-201ENST00000323701 TMEM255BQ8WV15 326 aa17■□□□□ 0.31
USP39-201ENST00000323701 SLC41A3Q96GZ6 507 aa17■□□□□ 0.31
USP39-201ENST00000323701 UCK2Q9BZX2 261 aa17■□□□□ 0.31
USP39-201ENST00000323701 TRIM45Q9H8W5 580 aaPredicted RBP17■□□□□ 0.31
USP39-201ENST00000323701 LIN28AQ9H9Z2 209 aaKnown RBP17■□□□□ 0.31
USP39-201ENST00000323701 PRODH2Q9UF12 536 aa17■□□□□ 0.31
USP39-201ENST00000323701 SLC7A7Q9UM01 511 aa17■□□□□ 0.31
USP39-201ENST00000323701 MGAT4BQ9UQ53 548 aa17■□□□□ 0.31
USP39-201ENST00000323701 EP300Q09472 2414 aaPredicted RBP17■□□□□ 0.31
USP39-201ENST00000323701 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.99■□□□□ 0.31
USP39-201ENST00000323701 IDSB3KWA1 339 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 CD59P13987 128 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 EIPR1Q53HC9 387 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 CCDC157Q569K6 752 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 FAM199XQ6PEV8 388 aaPredicted RBP16.99■□□□□ 0.31
USP39-201ENST00000323701 PRR22Q8IZ63 422 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 PLPP5Q8NEB5 264 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 FAM81AQ8TBF8 368 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 NMD3Q96D46 503 aaKnown RBP16.99■□□□□ 0.31
USP39-201ENST00000323701 GAL3ST4Q96RP7 486 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 APOL4Q9BPW4 351 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 RBM38Q9H0Z9 239 aaKnown RBP16.99■□□□□ 0.31
USP39-201ENST00000323701 ZNF226Q9NYT6 803 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 TEX51A0A1B0GUA7 166 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 PIP5K1CO60331 668 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 LYPD3O95274 346 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 ANGPTL1O95841 491 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 FGF5P12034 268 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 DRD5P21918 477 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 EEF1B2P24534 225 aaKnown RBP16.99■□□□□ 0.31
USP39-201ENST00000323701 CRISP1P54107 249 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 NR1H2P55055 460 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 SETD9Q8NE22 299 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 SLC46A1Q96NT5 459 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 PRSS27Q9BQR3 290 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 DGCR6LQ9BY27 220 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 YTHDF1Q9BYJ9 559 aaKnown RBP16.99■□□□□ 0.31
USP39-201ENST00000323701 CACYBPQ9HB71 228 aaKnown RBP16.99■□□□□ 0.31
USP39-201ENST00000323701 DNAJB12Q9NXW2 375 aaKnown RBP16.99■□□□□ 0.31
USP39-201ENST00000323701 CNIH4Q9P003 139 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 COMMD3-BMI1R4GMX3 469 aa16.99■□□□□ 0.31
USP39-201ENST00000323701 CELSR3Q9NYQ7 3312 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 A0A087WXM4 84 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 PMS2P1A4D2B8 440 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 PTGES3LE9PB15 166 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 GALR2O43603 387 aaPredicted RBP16.98■□□□□ 0.31
USP39-201ENST00000323701 KRT20P35900 424 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 PPICP45877 212 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 ALDH3B2P48448 385 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 GPR143P51810 404 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 TUBA4AP68366 448 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 OCA2Q04671 838 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 ST3GAL3Q11203 375 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 TRAM2Q15035 370 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 EBPQ15125 230 aaKnown RBP16.98■□□□□ 0.31
USP39-201ENST00000323701 OR1Q1Q15612 314 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 ZNF141Q15928 474 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 RBM48Q5RL73 367 aaKnown RBP16.98■□□□□ 0.31
USP39-201ENST00000323701 C1orf94Q6P1W5 598 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 POLR2J3Q9H1A7 115 aaKnown RBP16.98■□□□□ 0.31
USP39-201ENST00000323701 HEATR5AQ86XA9 2040 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 OTOGLQ3ZCN5 2332 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 ZAR1LA6NP61 321 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 MEN1O00255 615 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 POLR1CO15160 346 aaPredicted RBP16.98■□□□□ 0.31
USP39-201ENST00000323701 OSMP13725 252 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 ACAA2P42765 397 aaKnown RBP16.98■□□□□ 0.31
USP39-201ENST00000323701 UGT2B15P54855 530 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms