RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 PLPPR5Q32ZL2 321 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 XKR7Q5GH72 579 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 EXOSC6Q5RKV6 272 aaKnown RBP11.09□□□□□ -0.63
TPM3-204ENST00000323144 RNF165Q6ZSG1 346 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 C22orf34Q6ZV56 151 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 CHMP1BQ7LBR1 199 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 CAMKMTQ7Z624 323 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 LSRQ86X29 649 aaPredicted RBP11.09□□□□□ -0.63
TPM3-204ENST00000323144 COX18Q8N8Q8 333 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 OR4C3Q8NH37 302 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 FAM120BQ96EK7 910 aaKnown RBP11.09□□□□□ -0.63
TPM3-204ENST00000323144 ZBED6CLQ96FA7 236 aaPredicted RBP11.09□□□□□ -0.63
TPM3-204ENST00000323144 PIK3IP1Q96FE7 263 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 C16orf58Q96GQ5 468 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 ZC3HAV1LQ96H79 300 aaKnown RBP11.09□□□□□ -0.63
TPM3-204ENST00000323144 MARK4Q96L34 752 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 RNF145Q96MT1 663 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 WFIKKN1Q96NZ8 548 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 C1orf50Q9BV19 199 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 PTGES2Q9H7Z7 377 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 SDHAF3Q9NRP4 125 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 MID2Q9UJV3 735 aa11.09□□□□□ -0.63
TPM3-204ENST00000323144 NAV3Q8IVL0 2385 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 A0A1W2PRB8 838 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 ALG1L2C9J202 215 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 TBX19O60806 448 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 SPAG7O75391 227 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 TNFRSF21O75509 655 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 KCNK2O95069 426 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 CRHP06850 196 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 BCKDHAP12694 445 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 CRYGSP22914 178 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 HPCAL1P37235 193 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 EIF1AXP47813 144 aaKnown RBP11.08□□□□□ -0.64
TPM3-204ENST00000323144 CCT5P48643 541 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 PSMD4P55036 377 aaKnown RBP11.08□□□□□ -0.64
TPM3-204ENST00000323144 FOXF1Q12946 379 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 LASP1Q14847 261 aaKnown RBP11.08□□□□□ -0.64
TPM3-204ENST00000323144 PTGR1Q14914 329 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM3-204ENST00000323144 EXOC3L2Q2M3D2 409 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 NDUFAF6Q330K2 333 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 Q5PR19 223 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 Q71RC1 249 aaPredicted RBP11.08□□□□□ -0.64
TPM3-204ENST00000323144 TRABD2AQ86V40 505 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 CDRT4Q8N9R6 151 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 OR7A2PQ8NGA2 310 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 OR10D3Q8NH80 312 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 POC1BQ8TC44 478 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 CDS1Q92903 461 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 ARSGQ96EG1 525 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 METTL2AQ96IZ6 378 aaKnown RBP11.08□□□□□ -0.64
TPM3-204ENST00000323144 ADGRG7Q96K78 797 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 MED18Q9BUE0 208 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 ANKZF1Q9H8Y5 726 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 C3orf14Q9HBI5 128 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 ZCCHC3Q9NUD5 404 aaKnown RBP11.08□□□□□ -0.64
TPM3-204ENST00000323144 MED17Q9NVC6 651 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 GIN1Q9NXP7 522 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 SH3BP4Q9P0V3 963 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 NTMQ9P121 344 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 MRTO4Q9UKD2 239 aaKnown RBP11.08□□□□□ -0.64
TPM3-204ENST00000323144 EIF3LQ9Y262 564 aaKnown RBP11.08□□□□□ -0.64
TPM3-204ENST00000323144 WBP11Q9Y2W2 641 aaKnown RBP11.08□□□□□ -0.64
TPM3-204ENST00000323144 AP4B1Q9Y6B7 739 aa11.08□□□□□ -0.64
TPM3-204ENST00000323144 TNFSF11O14788 317 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 EMC8O43402 210 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 NDUFB5O43674 189 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 CXCL13O43927 109 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 TRIM13O60858 407 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 SS18L1O75177 396 aaPredicted RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 NGFRP08138 427 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 CD8BP10966 210 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 FCGR2AP12318 317 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 PSMA4P25789 261 aaKnown RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 HOXC12P31275 282 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 KCNJ5P48544 419 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 CLK3P49761 638 aaKnown RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 MANFP55145 182 aaKnown RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 ZNF117Q03924 483 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 C17orf67Q0P5P2 114 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 UGT3A2Q3SY77 523 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 VPS26BQ4G0F5 336 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 ARL13AQ5H913 290 aaPredicted RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.07□□□□□ -0.64
TPM3-204ENST00000323144 ANKRD34AQ69YU3 496 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 GTPBP8Q8N3Z3 284 aaPredicted RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 BANPQ8N9N5 519 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 EIF1ADQ8N9N8 165 aaKnown RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 ZNF610Q8N9Z0 462 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 C3orf30Q96M34 536 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 TRMOQ9BU70 441 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 IQCGQ9H095 443 aaKnown RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 CXorf36Q9H7Y0 433 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 PPCSQ9HAB8 311 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 ACSS1Q9NUB1 689 aaPredicted RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 BEX4Q9NWD9 120 aaPredicted RBP11.07□□□□□ -0.64
TPM3-204ENST00000323144 NDRG3Q9UGV2 375 aa11.07□□□□□ -0.64
TPM3-204ENST00000323144 PROCRQ9UNN8 238 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms