RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 KCNE1P15382 129 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 POLR2CP19387 275 aaPredicted RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 NFATC4Q14934 902 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 ELOCQ15369 112 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 SMYD5Q6GMV2 418 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 DBF4BQ8NFT6 615 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 PINK1Q9BXM7 581 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 PRDM9Q9NQV7 894 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 NUPL2O15504 423 aaKnown RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 SERPINA5P05154 406 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 BOLLQ8N9W6 283 aaKnown RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 FRS2Q8WU20 508 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 UPRTQ96BW1 309 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 GRXCR2A6NFK2 248 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 WTIPA6NIX2 430 aaPredicted RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 ARHGAP19Q14CB8 494 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 DEFB134Q4QY38 66 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 OR52N2Q8NGI0 321 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 CHTF18Q8WVB6 975 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 KIAA1143Q96AT1 154 aaPredicted RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 MT-ND4P03905 459 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 HOXB2P14652 356 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 FDXRP22570 491 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 ACY1Q03154 408 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 TXNDC8Q6A555 127 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 DCP2Q8IU60 420 aaKnown RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 FAM53CQ9NYF3 392 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 ENPP4Q9Y6X5 453 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 CYB5BO43169 146 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 CRABP1P29762 137 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 SBSNQ6UWP8 590 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 SERPINA11Q86U17 422 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 OR56B4Q8NH76 319 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 GKN1Q9NS71 199 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 SAGE1Q9NXZ1 904 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 RPS10-NUDT3A0A1W2PQS6 291 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 RPS10P46783 165 aaKnown RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 THBS3P49746 956 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 PARP16Q8N5Y8 322 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 PGAP3Q96FM1 320 aaPredicted RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 ZNF286AQ9HBT8 521 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 THSD1Q9NS62 852 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 GHRLQ9UBU3 117 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 AGAP14A8MT82 685 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 CEACAM7Q14002 265 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 CMTM8Q8IZV2 173 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 SLC5A8Q8N695 610 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 SORCS2Q96PQ0 1159 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 UQCC2Q9BRT2 126 aa15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 AK6Q9Y3D8 172 aaKnown RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 GIMAP1Q8WWP7 306 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 NICN1Q9BSH3 213 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 ZNF860A6NHJ4 632 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 RNF212BA8MTL3 300 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 FANCGO15287 622 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 UGDHO60701 494 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 PPP1R3DO95685 299 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 ARRB1P49407 418 aaPredicted RBP15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 BDH1Q02338 343 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 CSNK1A1LQ8N752 337 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 SIMC1Q8NDZ2 872 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 KCNK12Q9HB15 430 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 KNTC1P50748 2209 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 CD300LBA8K4G0 201 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 ZNF33BQ06732 778 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 RBMS2Q15434 407 aaKnown RBP15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 DUSP7Q16829 419 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 LIX1LQ8IVB5 337 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 IL20RAQ9UHF4 553 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 KIAA1217Q5T5P2 1943 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 FEZF1A0PJY2 475 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 OR5K4A6NMS3 321 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 KIAA0895LQ68EN5 471 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 COL14A1Q05707 1796 aaKnown RBP15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 A6NIZ1 184 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 DHPSP49366 369 aaPredicted RBP15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 RAP1BP61224 184 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 RAP1AP62834 184 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 SELENOWP63302 87 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 OR4K5Q8NGD3 323 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 ZFP90Q8TF47 636 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 TFAP2CQ92754 450 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 NOX3Q9HBY0 568 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 ZNF541Q9H0D2 1346 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 PHLPP1O60346 1717 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 TNFSF12O43508 249 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 PEX14O75381 377 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 PLA2G7Q13093 441 aa15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 KIAA0907Q7Z7F0 614 aaPredicted RBP15.96■□□□□ 0.15
SMCHD1-201ENST00000320876 K7EPK0 472 aa15.96■□□□□ 0.14
SMCHD1-201ENST00000320876 NRP1O14786 923 aa15.96■□□□□ 0.14
SMCHD1-201ENST00000320876 KIAA0355O15063 1070 aa15.96■□□□□ 0.14
SMCHD1-201ENST00000320876 CCNJQ5T5M9 372 aa15.96■□□□□ 0.14
SMCHD1-201ENST00000320876 FAM71E2Q8N5Q1 922 aa15.96■□□□□ 0.14
SMCHD1-201ENST00000320876 OR6T1Q8NGN1 323 aa15.96■□□□□ 0.14
SMCHD1-201ENST00000320876 TMEM19Q96HH6 336 aa15.96■□□□□ 0.14
SMCHD1-201ENST00000320876 PDE7BQ9NP56 450 aa15.96■□□□□ 0.14
SMCHD1-201ENST00000320876 CPNE7Q9UBL6 633 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms