RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 REM1O75628 298 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 NDUFV2P19404 249 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 FPR3P25089 353 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 STAT5AP42229 794 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 DSG2Q14126 1118 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 DECR1Q16698 335 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 TMEM196Q5HYL7 178 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 ZC3H14Q6PJT7 736 aaKnown RBP16.23■□□□□ 0.19
COL9A1-201ENST00000320755 MBOAT2Q6ZWT7 520 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 KLHL36Q8N4N3 616 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 GAL3ST3Q96A11 431 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 MS4A4EQ96PG1 132 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 UBQLN3Q9H347 655 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 C20orf141Q9NUB4 165 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 MRPS18AQ9NVS2 196 aaKnown RBP16.23■□□□□ 0.19
COL9A1-201ENST00000320755 LYARQ9NX58 379 aaKnown RBP16.23■□□□□ 0.19
COL9A1-201ENST00000320755 OR6C2Q9NZP2 312 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 PTGFRNQ9P2B2 879 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 MRPS2Q9Y399 296 aaKnown RBP16.23■□□□□ 0.19
COL9A1-201ENST00000320755 DENND4AQ7Z401 1863 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 IRGMA1A4Y4 181 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 K7EQS6 105 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 ZNF155Q12901 538 aaPredicted RBP16.22■□□□□ 0.19
COL9A1-201ENST00000320755 GJD3Q8N144 294 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 ENKURQ8TC29 256 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 PATE1Q8WXA2 126 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 AP3S1Q92572 193 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 OR51V1Q9H2C8 321 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 RMI1Q9H9A7 625 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 CBLCQ9ULV8 474 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 TRIOO75962 3097 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 GABRPO00591 440 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 LINC01565O15544 149 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 MRPL3P09001 348 aaKnown RBP16.22■□□□□ 0.19
COL9A1-201ENST00000320755 EXOSC7Q15024 291 aaKnown RBP16.22■□□□□ 0.19
COL9A1-201ENST00000320755 DUSP6Q16828 381 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 CXXC5Q7LFL8 322 aaKnown RBP16.22■□□□□ 0.19
COL9A1-201ENST00000320755 Q8N402 240 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 OR5T3Q8NGG3 340 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 SDF2Q99470 211 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 C1QTNF7Q9BXJ2 289 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 CLCA3PQ9Y6N3 262 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 A0A1B0GVC2 190 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 A6NIN4 97 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 C12orf71A8MTZ7 269 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 SLC2A2P11168 524 aaPredicted RBP16.22■□□□□ 0.19
COL9A1-201ENST00000320755 IFI30P13284 250 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 NT5EP21589 574 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 PAICSP22234 425 aaKnown RBP16.22■□□□□ 0.19
COL9A1-201ENST00000320755 CD83Q01151 205 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 TNFRSF17Q02223 184 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 PRAMEF8Q5VWM4 474 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 PRAMEF7Q5VXH5 474 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 CDC73Q6P1J9 531 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 SFTPA2Q8IWL1 248 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 FRMD1Q8N878 549 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 C19orf18Q8NEA5 215 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 TP53INP1Q96A56 240 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 ST6GAL2Q96JF0 529 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 FYTTD1Q96QD9 318 aaKnown RBP16.22■□□□□ 0.19
COL9A1-201ENST00000320755 OR52D1Q9H346 318 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 STARD5Q9NSY2 213 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 NLGN3Q9NZ94 848 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 GRIP1Q9Y3R0 1128 aa16.22■□□□□ 0.19
COL9A1-201ENST00000320755 OR6C74A6NCV1 312 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 CENPXA8MT69 81 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 PLA2G10O15496 165 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 PLRG1O43660 514 aaKnown RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 AKAP8O43823 692 aaKnown RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 TLX1P31314 330 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 PBX2P40425 430 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 RPS15AP62244 130 aaKnown RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 TFF2Q03403 129 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 CCDC92Q53HC0 331 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 TRIQKQ629K1 86 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 FBXO46Q6PJ61 603 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 WDR88Q6ZMY6 472 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 MRGPREQ86SM8 312 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 POGLUT1Q8NBL1 392 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 HCAR1Q9BXC0 346 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 TTTY10Q9BZA0 68 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 KIR3DX1Q9H7L2 352 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 RANGRFQ9HD47 186 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 KCMF1Q9P0J7 381 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 FAM25AB3EWG3 89 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 FAM25CB3EWG5 89 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 FAM25GB3EWG6 89 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 B3GALT2O43825 422 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 HLA-DPB1P04440 258 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 PSKH1P11801 424 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 EN2P19622 333 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 COL9A1P20849 921 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 MYL9P24844 172 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 KIR2DL1P43626 348 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 KIR2DL3P43628 341 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 RACK1P63244 317 aaKnown RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 CSTF1Q05048 431 aaKnown RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 GDPD1Q8N9F7 314 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 OR10H4Q8NGA5 316 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 OR51A7Q8NH64 312 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms