RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ARHGAP33O14559 1287 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 CDC42EP2O14613 210 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 MAGEB3O15480 346 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 MAOAP21397 527 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 S1PR1P21453 382 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 HTR2AP28223 471 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 CSTF2P33240 577 aaKnown RBP eCLIP7.02□□□□□ -1.29
IFT88-201ENST00000319980 SOX3P41225 446 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 MAP3K8P41279 467 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 PGDP52209 483 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 ITGADQ13349 1161 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 ZNF267Q14586 743 aaPredicted RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 SPHARQ15513 63 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 NNATQ16517 81 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 SLC38A2Q96QD8 506 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 CNPPD1Q9BV87 410 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 HMG20AQ9NP66 347 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 NLGN3Q9NZ94 848 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 OSGIN1Q9UJX0 560 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 TRAPPC13A5PLN9 417 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 RHPN2P1A8MT19 583 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 CCRL2O00421 344 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 KPNA4O00629 521 aaPredicted RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 CTNSO60931 367 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 COQ9O75208 318 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 NKX2-2O95096 273 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 AK1P00568 194 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 RPS4Y1P22090 263 aaKnown RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 FPR3P25089 353 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 EMDP50402 254 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 FAM53BQ14153 422 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 KCNAB1Q14722 419 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 OR1Q1Q15612 314 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 ZNHIT3Q15649 155 aaPredicted RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 PDZK1Q5T2W1 519 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 IGFN1Q86VF2 1251 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 MCFD2Q8NI22 146 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 TMEM163Q8TC26 289 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 SHDQ96IW2 340 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 POLR2J2Q9GZM3 115 aaKnown RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 SPRTNQ9H040 489 aaPredicted RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 PDE7BQ9NP56 450 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 PRTFDC1Q9NRG1 225 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 IL20Q9NYY1 176 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 LRIT1Q9P2V4 623 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 PLCL2Q9UPR0 1127 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 DTX4Q9Y2E6 619 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 TMEM184BQ9Y519 407 aaPredicted RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 MAU2Q9Y6X3 613 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 KMT2EQ8IZD2 1858 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 MYL12BO14950 172 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 CSO75390 466 aaKnown RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 NSA2O95478 260 aaKnown RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 IFNA16P05015 189 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 HBQ1P09105 142 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 FUT1P19526 365 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 BCKDHBP21953 392 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 STAT5AP42229 794 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 SEPHS1P49903 392 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 NXPH1P58417 271 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 STARD6P59095 220 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 TUBA1BP68363 451 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 RHAGQ02094 409 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 SSX1Q16384 188 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 C11orf91Q3C1V1 193 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 SLC25A30Q5SVS4 291 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 WDR88Q6ZMY6 472 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 USP43Q70EL4 1123 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 TUBA1AQ71U36 451 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 ANKK1Q8NFD2 765 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 TOR1AIP2Q8NFQ8 470 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 OR52I1Q8NGK6 324 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 OR51Q1Q8NH59 317 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 OSTF1Q92882 214 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 FGF11Q92914 225 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 ABTB1Q969K4 478 aaPredicted RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 AHCYL2Q96HN2 611 aaKnown RBP7.02□□□□□ -1.29
IFT88-201ENST00000319980 DGAT2Q96PD7 388 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 OPALINQ96PE5 141 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 PRSS27Q9BQR3 290 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 MND1Q9BWT6 205 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 DPH1Q9BZG8 443 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 FOLH1BQ9HBA9 442 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 ATP13A2Q9NQ11 1180 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 WNT16Q9UBV4 365 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 CARD8Q9Y2G2 431 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 SPAG17Q6Q759 2223 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 TLCD2A6NGC4 264 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PRODHO43272 600 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 HRO43593 1189 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PFDN1O60925 122 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 SCG5P05408 212 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 ALAS2P22557 587 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 GABRA4P48169 554 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 FNTBP49356 437 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PLAURQ03405 335 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 C1DQ13901 141 aaKnown RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 ZNF846Q147U1 533 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 AMZ1Q400G9 498 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms