RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 NXF5Q9H1B4 397 aaKnown RBP11.85□□□□□ -0.51
SYCN-201ENST00000318438 TUBB1Q9H4B7 451 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 MIEF1Q9NQG6 463 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 C1orf109Q9NX04 203 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 TAS2R7Q9NYW3 318 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 PRODH2Q9UF12 536 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 BCAP29Q9UHQ4 241 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 TRRAPQ9Y4A5 3859 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 LSM1O15116 133 aaKnown RBP11.84□□□□□ -0.51
SYCN-201ENST00000318438 ACOX3O15254 700 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 SSX4O60224 188 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 LMX1BO60663 402 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 BCAS2O75934 225 aaPredicted RBP11.84□□□□□ -0.51
SYCN-201ENST00000318438 SLITRK5O94991 958 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 CGAP01215 116 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 CRHP06850 196 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 PCSK2P16519 638 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 TBXA2RP21731 343 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 ABCD3P28288 659 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 GCKP35557 465 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 CASP3P42574 277 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 EMDP50402 254 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 C2orf80Q0P641 193 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 EXOC3L2Q2M3D2 409 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 UGT3A2Q3SY77 523 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 TNFAIP8L3Q5GJ75 292 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 SH2D4BQ5SQS7 431 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 CEP85LQ5SZL2 805 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 FAM120AOSQ5T036 256 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 TIGD3Q6B0B8 471 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 CYB5R2Q6BCY4 276 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 ENPP6Q6UWR7 440 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 ZCCHC23Q6ZST2 131 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 WFDC8Q8IUA0 241 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 FAM9CQ8IZT9 166 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.84□□□□□ -0.51
SYCN-201ENST00000318438 OR6Y1Q8NGX8 325 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 ZNF764Q96H86 408 aaPredicted RBP11.84□□□□□ -0.51
SYCN-201ENST00000318438 TMEM41AQ96HV5 264 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 ZNF845Q96IR2 970 aaPredicted RBP11.84□□□□□ -0.51
SYCN-201ENST00000318438 LCORQ96JN0 433 aaPredicted RBP11.84□□□□□ -0.51
SYCN-201ENST00000318438 ZIM3Q96PE6 472 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 CCT7Q99832 543 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 STMN4Q9H169 189 aaPredicted RBP11.84□□□□□ -0.51
SYCN-201ENST00000318438 CHODLQ9H9P2 273 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 TMED5Q9Y3A6 229 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 TRAF6Q9Y4K3 522 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 ACTL7BQ9Y614 415 aa11.84□□□□□ -0.51
SYCN-201ENST00000318438 DYSFO75923 2080 aa11.83□□□□□ -0.51
SYCN-201ENST00000318438 MYO1GB0I1T2 1018 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 TMEM233B4DJY2 109 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 PIP5K1BO14986 540 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 TM9SF1O15321 606 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 HCRTR2O43614 444 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 PLOD3O60568 738 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 LINC00032P0C843 101 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 IGHV4-31P0DP07 118 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 NAGAP17050 411 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 NTSP30990 170 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 ARRB2P32121 409 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 PPICP45877 212 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 SERPINB4P48594 390 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 LHX2P50458 406 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 PSPHP78330 225 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 RPP38P78345 283 aaKnown RBP11.83□□□□□ -0.52
SYCN-201ENST00000318438 NNATQ16517 81 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 ALKBH2Q6NS38 261 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 ANGPTL8Q6UXH0 198 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 LRIG3Q6UXM1 1119 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 EXOC3L1Q86VI1 746 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 DDIASQ8IXT1 998 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 OR1J4Q8NGS1 313 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 OR14L1PQ8NHC6 308 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 SGMS2Q8NHU3 365 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 SMAP2Q8WU79 429 aaPredicted RBP11.83□□□□□ -0.52
SYCN-201ENST00000318438 NEUROG1Q92886 237 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 FBXW5Q969U6 566 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 BTBD9Q96Q07 612 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 BBS4Q96RK4 519 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 SERHLQ9NQF3 203 aa11.83□□□□□ -0.52
SYCN-201ENST00000318438 EXO1Q9UQ84 846 aaKnown RBP11.83□□□□□ -0.52
SYCN-201ENST00000318438 PRKDCP78527 4128 aaKnown RBP11.83□□□□□ -0.52
SYCN-201ENST00000318438 PCNX3Q9H6A9 2034 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 FREM1Q5H8C1 2179 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 A0A087WV62 115 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 A0A0G2JK05 382 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 SLC35F4A4IF30 521 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 TO15178 435 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 BIRC5O15392 142 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 CLOCKO15516 846 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 COQ9O75208 318 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 ERLIN1O75477 346 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 PPM1BO75688 479 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 ABCB1P08183 1280 aaPredicted RBP11.82□□□□□ -0.52
SYCN-201ENST00000318438 MYZAPP0CAP1 466 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 ITGA2P17301 1181 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 SDC1P18827 310 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 DRD5P21918 477 aa11.82□□□□□ -0.52
SYCN-201ENST00000318438 NCBP2P52298 156 aaKnown RBP eCLIP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms