RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 XKR7Q5GH72 579 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 TCTE1Q5JU00 501 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF704Q6ZNC4 412 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ACOT7LQ6ZUV0 252 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 OR2T4Q8NH00 348 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GIMAP1Q8WWP7 306 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 RERGQ96A58 199 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 BMFQ96LC9 184 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 EDEM2Q9BV94 578 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 NXF2Q9GZY0 626 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ADAM18Q9Y3Q7 739 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 RAI2Q9Y5P3 530 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 COLEC10Q9Y6Z7 277 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 TRAV6A0A075B6T7 132 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 B4DXG7 233 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 NCR1O76036 304 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 FABP1P07148 127 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ALAS2P22557 587 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 PRPH2P23942 346 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SNCAP37840 140 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MAGEB1P43366 347 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CX3CR1P49238 355 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 C1orf220Q5T0J3 134 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SH2D5Q6ZV89 423 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 DDX53Q86TM3 631 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 C3orf58Q8NDZ4 430 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 HERVK_113Q902F9 699 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 URM1Q9BTM9 101 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 FBXO7Q9Y3I1 522 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 PCDHB14Q9Y5E9 798 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF541Q9H0D2 1346 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GPR39O43194 453 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 NFYBP25208 207 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CCND3P30281 292 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 EPHX2P34913 555 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ATXN1P54253 815 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 OR4D2P58180 307 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 DBPQ10586 325 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 RAB11BQ15907 218 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CTXN3Q4LDR2 81 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MPPE1Q53F39 396 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 NIPAL3Q6P499 406 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CEACAM20Q6UY09 585 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GPAT4Q86UL3 456 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 NXPE1Q8N323 547 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CERS5Q8N5B7 392 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 NDRG1Q92597 394 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ATG4CQ96DT6 458 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 KXD1Q9BQD3 176 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 G6PC3Q9BUM1 346 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ACTL8Q9H568 366 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 NEMP2A6NFY4 417 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MOXD2PA6NHM9 499 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF587BE7ETH6 402 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SLC33A1O00400 549 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ABCD4O14678 606 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 PEX10O60683 326 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 BEST1O76090 585 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CHRM5P08912 532 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 THEGLP0DJG4 465 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ZBTB48P10074 688 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SERPINF1P36955 418 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 STK19P49842 368 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 OR10A3P58181 314 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MADCAM1Q13477 382 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 HLA-DQA1Q5Y7H0 255 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 FAHD1Q6P587 224 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ARL9Q6T311 187 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SHFQ7M4L6 423 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ISCA2Q86U28 154 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF565Q8N9K5 539 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MYLIPQ8WY64 445 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 RSPRY1Q96DX4 576 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 PINK1Q9BXM7 581 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SHARPINQ9H0F6 387 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 KLK14Q9P0G3 267 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 EPHA6Q9UF33 1036 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SOWAHBA6NEL2 793 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GPR89AB7ZAQ6 455 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 KHNYNO15037 678 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SYT7O43581 403 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SRPX2O60687 465 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 DIRAS1O95057 198 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 HLA-HP01893 362 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 VTNP04004 478 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CYP17A1P05093 508 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 INHBBP09529 407 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SLC35G4P0C7Q5 338 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SLC35G6P0C7Q6 338 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GPR89BP0CG08 455 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 RAB5AP20339 215 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 RFX3P48380 749 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MMP15P51511 669 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CLCN7P51798 805 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ARF5P84085 180 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CHAF1BQ13112 559 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 RNASE10Q5GAN6 216 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 C5orf46Q6UWT4 87 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 TMEM173Q86WV6 379 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 C1orf87Q8N0U7 546 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms