RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 RIIAD1A6NNX1 92 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 K7ERQ8 282 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 IFNA4P05014 189 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ADRB1P08588 477 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 CD8BP10966 210 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 BTCP35070 178 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 FRKP42685 505 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MAZP56270 477 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SCAND1P57086 179 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MPEG1Q2M385 716 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GDF6Q6KF10 455 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 LIN54Q6MZP7 749 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PXKQ7Z7A4 578 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 CELF5Q8N6W0 485 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MOSPD2Q8NHP6 518 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 CEP76Q8TAP6 659 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 DIO2Q92813 273 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 RIT1Q92963 219 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 FBXW5Q969U6 566 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SLC38A3Q99624 504 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 UTP23Q9BRU9 249 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PDCD10Q9BUL8 212 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 TAS2R10Q9NYW0 307 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MGAT4CQ9UBM8 478 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MAFFQ9ULX9 164 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PPIEQ9UNP9 301 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 OR2AG2A6NM03 316 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 D6RAR5 112 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GRM6O15303 877 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MID1O15344 667 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 TSPAN6O43657 245 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 RAD1O60671 282 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 C1QCP02747 245 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 URODP06132 367 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ASGR1P07306 291 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 CSNK2A2P19784 350 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 CXCL3P19876 107 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PRKAR1BP31321 381 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MC1RQ01726 317 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 KLF9Q13886 244 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 IRF4Q15306 451 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 EIPR1Q53HC9 387 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PRAMEF14Q5SWL7 426 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PRAMEF19Q5SWL8 479 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PRAMEF13Q5VWM6 474 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MFSD14CQ5VZR4 134 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 VRK3Q8IV63 474 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 OR4F15Q8NGB8 312 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 OR5W2Q8NH69 310 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GLYATL1Q969I3 302 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SIPA1Q96FS4 1042 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SLITRK2Q9H156 845 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 RHBGQ9H310 441 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MVB12BQ9H7P6 319 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 DDX31Q9H8H2 851 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 BIN3Q9NQY0 253 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 HAO2Q9NYQ3 351 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MKL2Q9ULH7 1088 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SCML1Q9UN30 329 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ENTPD4Q9Y227 616 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ZFC3H1O60293 1989 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SHISA3A0PJX4 238 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 M0R3H8 397 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SIGLEC6O43699 453 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PRG2P13727 222 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ACTA2P62736 377 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ACTG2P63267 376 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GK2Q14410 553 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ACSM3Q53FZ2 586 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 OLFML2AQ68BL7 652 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 LPCAT3Q6P1A2 487 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 RPL22L1Q6P5R6 122 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 UQCC3Q6UW78 93 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MCATQ8IVS2 390 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 LNX2Q8N448 690 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GPR62Q9BZJ7 368 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ALX4Q9H161 411 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 UBQLN3Q9H347 655 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 NPDC1Q9NQX5 325 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GMEB2Q9UKD1 530 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 C17orf113A0A1B0GUU1 675 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 KIAA0355O15063 1070 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 EIF4EP06730 217 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 TRIM23P36406 574 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ST3GAL2Q16842 350 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SLC30A6Q6NXT4 461 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 Q6ZVL8 140 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 KANSL1Q7Z3B3 1105 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GLCCI1Q86VQ1 547 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 CCDC107Q8WV48 283 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 POF1BQ8WVV4 589 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MRPS31Q92665 395 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 S100A16Q96FQ6 103 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 BBS4Q96RK4 519 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MCHR1Q99705 422 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PLA2G12AQ9BZM1 189 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 C20orf85Q9H1P6 137 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 NOX3Q9HBY0 568 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 TAAR2Q9P1P5 351 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MLXQ9UH92 298 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms