RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 MCFD2Q8NI22 146 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 PIK3R3Q92569 461 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 MND1Q9BWT6 205 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 UCK2Q9BZX2 261 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 MOV10Q9HCE1 1003 aaKnown RBP7.23□□□□□ -1.25
CNOT4-201ENST00000315544 HINT3Q9NQE9 182 aaKnown RBP7.23□□□□□ -1.25
CNOT4-201ENST00000315544 FBXO34Q9NWN3 711 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF624Q9P2J8 865 aaPredicted RBP7.23□□□□□ -1.25
CNOT4-201ENST00000315544 PCDHGA5Q9Y5G8 931 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 A0A087WV62 115 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 A0A0B4J2E0 115 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 A0A1B0GX12 115 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 FAM170BA6NMN3 283 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 CENPBD1B2RD01 187 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 E5RI56 91 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 GUCY1B2O75343 617 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 UPK3AO75631 287 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 UQCRC1P31930 480 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 PTH2RP49190 550 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 BTG1P62324 171 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 PLIN5Q00G26 463 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 PIN1Q13526 163 aaPredicted RBP7.23□□□□□ -1.25
CNOT4-201ENST00000315544 RUNX3Q13761 415 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 FAM53BQ14153 422 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 ZBTB37Q5TC79 503 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 FDX2Q6P4F2 183 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF836Q6ZNA1 936 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 USP53Q70EK8 1073 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 SYT12Q8IV01 421 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 MFSD9Q8NBP5 474 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 ASPNQ9BXN1 380 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 REEP1Q9H902 201 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 TBC1D17Q9HA65 648 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 CAPN10Q9HC96 672 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 RBFOX1Q9NWB1 397 aaKnown RBP7.23□□□□□ -1.25
CNOT4-201ENST00000315544 SPHK1Q9NYA1 384 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 RAPGEFL1Q9UHV5 662 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 CARD8Q9Y2G2 431 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 KCNMB2Q9Y691 235 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 TTC36A6NLP5 189 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 PIP5K1CO60331 668 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 CTSVO60911 334 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 SLC43A1O75387 559 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 TPPPO94811 219 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 EIF4EP06730 217 aaKnown RBP7.23□□□□□ -1.25
CNOT4-201ENST00000315544 KLK1P06870 262 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 COX7A2P14406 83 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 MPZP25189 248 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 ADH7P40394 386 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 CDH12P55289 794 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 QRFPP83859 136 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 OR4C11Q6IEV9 310 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 CYB5D2Q8WUJ1 264 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 COQ7Q99807 217 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 RTN4RQ9BZR6 473 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 CHRNA10Q9GZZ6 450 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 NEUROD4Q9HD90 331 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 TBC1D14Q9P2M4 693 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 KLHL13Q9P2N7 655 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 RHCGQ9UBD6 479 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 DKK4Q9UBT3 224 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.23□□□□□ -1.25
CNOT4-201ENST00000315544 DAPK2Q9UIK4 370 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 SCML1Q9UN30 329 aa7.23□□□□□ -1.25
CNOT4-201ENST00000315544 OR2AG2A6NM03 316 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 SOX30O94993 753 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 AIFM1O95831 613 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 ELK1P19419 428 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 NPR2P20594 1047 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 IGFALSP35858 605 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 RNF144AP50876 292 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-201ENST00000315544 MMP15P51511 669 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 DBPQ10586 325 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-201ENST00000315544 NHLRC3Q5JS37 347 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 TAS2R42Q7RTR8 314 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 GPALPP1Q8IXQ4 340 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 TMCO5AQ8N6Q1 288 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF441Q8N8Z8 693 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 UBE2E3Q969T4 207 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 RGMAQ96B86 450 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 TIMM29Q9BSF4 260 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 EDEM2Q9BV94 578 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 MIR1-1HGQ9H1L0 117 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 SLA2Q9H6Q3 261 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 SCN3AQ9NY46 2000 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 TRAV19A0A0A6YYK7 116 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 A0A0G2JPF8 293 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 LOC390937A0A1W2PQ73 354 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 HNRNPCL2B2RXH8 293 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 HNRNPCL3B7ZW38 293 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 M0R3H8 397 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 TLR4O00206 839 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 NPIPB7O75200 414 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 CBX7O95931 251 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 IGLV3-1P01715 115 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 CT62P0C5K7 136 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 HNRNPCL4P0DMR1 293 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 NAGAP17050 411 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 ADRA2CP18825 462 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 IL12RB1P42701 662 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms