RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 CD2P06729 351 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 FOSL2P15408 326 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 PRPH2P23942 346 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 CTXN1P60606 82 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ZNF45Q02386 682 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 CNRIP1Q96F85 164 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 BMFQ96LC9 184 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SDHAF3Q9NRP4 125 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TMEFF2Q9UIK5 374 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 CDH10Q9Y6N8 788 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TRAV27A0A087WT01 109 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 FUOMA2VDF0 154 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TMX2-CTNND1H3BSU7 103 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 CTDSP2O14595 271 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TBC1D20Q96BZ9 403 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 C7orf34Q96L11 122 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 PELOQ9BRX2 385 aaKnown RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 WASH6PQ9NQA3 447 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TTC3P53804 2025 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SCN9AQ15858 1988 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 POLR1CO15160 346 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 MYH4Q9Y623 1939 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 KLK3P07288 261 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 GBX1Q14549 363 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ZNF517Q6ZMY9 492 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SLC46A3Q7Z3Q1 461 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 C19orf47Q8N9M1 422 aaKnown RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 MINDY2Q8NBR6 621 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SP7Q8TDD2 431 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ADOQ96SZ5 270 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 KCNE3Q9Y6H6 103 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ARID1AO14497 2285 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 RAB38P57729 211 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ERVK-25P63136 954 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 TCTN3Q6NUS6 607 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 OR4F15Q8NGB8 312 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 UCN3Q969E3 161 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 TNFRSF13CQ96RJ3 184 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 PRRG4Q9BZD6 226 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 SERINC1Q9NRX5 453 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 YY2O15391 372 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 IGHA2P01877 340 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 RORAP35398 523 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 TSFMP43897 325 aaKnown RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ACTC1P68032 377 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ACTA1P68133 377 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 OR1Q1Q15612 314 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 OR6Q1Q8NGQ2 317 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 TCEAL2Q9H3H9 227 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 A0A087WUU8 490 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 CXorf51AA0A1B0GTR3 108 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 NPIPA5E9PKD4 350 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 LAMTOR5O43504 91 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 PLRG1O43660 514 aaKnown RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 PPM1BO75688 479 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ST6GAL1P15907 406 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 MAP3K8P41279 467 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 CXCL12P48061 93 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 RHAGQ02094 409 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 RAB40BQ12829 278 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 RUNX2Q13950 521 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 TP53I13Q8NBR0 393 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 RPRD1BQ9NQG5 326 aaKnown RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 NPIPA1Q9UND3 350 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 VDAC3Q9Y277 283 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 GXYLT2A0PJZ3 443 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 PRODHO43272 600 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 SRPX2O60687 465 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ZNF24P17028 368 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 PPP3R1P63098 170 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ZP2Q05996 745 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 NKAIN2Q5VXU1 208 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 SLC35A4Q96G79 324 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 A8MV72 311 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 SEC14L2O76054 403 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ILKQ13418 452 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 C8orf82Q6P1X6 216 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 LRFN4Q6PJG9 635 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 SDR16C5Q8N3Y7 309 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 THAP4Q8WY91 577 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 BTBD2Q9BX70 525 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 CHIAQ9BZP6 476 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 CNOT2Q9NZN8 540 aaKnown RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 NDRG4Q9ULP0 352 aaKnown RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ZNF879B4DU55 563 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ARHGAP33O14559 1287 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 PRKYO43930 277 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 GABARAPO95166 117 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 HTR1AP08908 422 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 DMPKQ09013 629 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 SLX4IPQ5VYV7 408 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 PAMR1Q6UXH9 720 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ZNF627Q7L945 461 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 TMEM255BQ8WV15 326 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 TNS1Q9HBL0 1735 aaKnown RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 ANKRD31Q8N7Z5 1873 aa5.78□□□□□ -1.48
PRKDC-201ENST00000314191 PRKNO60260 465 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 JUNBP17275 347 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 CCBE1Q6UXH8 406 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-201ENST00000314191 NKD1Q969G9 470 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms