RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 LBPP18428 481 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 HK1P19367 917 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 BMP5P22003 454 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 RPS26P62854 115 aaKnown RBP13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 POU6F2P78424 691 aaPredicted RBP13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 C17orf67Q0P5P2 114 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 SPANXN4Q5MJ08 99 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 AAGABQ6PD74 315 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 ENPP6Q6UWR7 440 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 GGNQ86UU5 652 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 COX18Q8N8Q8 333 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 POC1BQ8TC44 478 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 MGARPQ8TDB4 240 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 ADGRG7Q96K78 797 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 ACTRT3Q9BYD9 372 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 TBL1XR1Q9BZK7 514 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 WDR55Q9H6Y2 383 aaPredicted RBP13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 AIG1Q9NVV5 245 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 THAP1Q9NVV9 213 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 KCNE5Q9UJ90 142 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 SNX8Q9Y5X2 465 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 GPR45Q9Y5Y3 372 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 FREM3P0C091 2139 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 NPIPA5A0A0B4J1W7 369 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 CENPVL1A0A0U1RR11 272 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 NPIPA7E9PJI5 369 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 H0Y3Z8 333 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 ERLIN1O75477 346 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 TNFSF13O75888 250 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 RCBTB2O95199 551 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 NPIPA8P0DM63 369 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 DDX5P17844 614 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 SSTR2P30874 369 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 ASCL1P50553 236 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 AGFG1P52594 562 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 CLDN20P56880 219 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 SRYQ05066 204 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 TP53BP2Q13625 1128 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 SNTB1Q13884 538 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 PLPPR5Q32ZL2 321 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 LSM12Q3MHD2 195 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 GLYR1Q49A26 553 aaPredicted RBP13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 KLHL26Q53HC5 615 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 DCST2Q5T1A1 773 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 HHATQ5VTY9 493 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 WDR75Q8IWA0 830 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 GATSQ8NAP1 163 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 RAB3IL1Q8TBN0 382 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 MIPOL1Q8TD10 442 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 JADE3Q92613 823 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 WNT2BQ93097 391 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 OR7D2Q96RA2 312 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 PAIP2Q9BPZ3 127 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 SDHAF3Q9NRP4 125 aa13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 MARCOQ9UEW3 520 aaPredicted RBP13.17□□□□□ -0.3
PPP1CA-201ENST00000312989 PRAMEF27A3QJZ7 478 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 FAM221AA4D161 298 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 C7orf72A4D263 438 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 C9JVG2 144 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 KLF11O14901 512 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 HDAC3O15379 428 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 IL18BPO95998 194 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 IL2RAP01589 272 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 LINGO3P0C6S8 592 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 NID1P14543 1247 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 CTSSP25774 331 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 EPHA3P29320 983 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 UFM1P61960 85 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 PLAURQ03405 335 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 TLE4Q04727 773 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 FUT5Q11128 374 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 RCAN2Q14206 197 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 GUSBP1Q15486 140 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 CTU2Q2VPK5 515 aaKnown RBP13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 PGS1Q32NB8 556 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 TTMPQ5BVD1 217 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 RAET1LQ5VY80 246 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 AP1ARQ63HQ0 302 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 CBLN3Q6UW01 205 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 OLIG3Q7RTU3 272 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 ANKRD46Q86W74 232 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 KIRREL3Q8IZU9 778 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 CHDHQ8NE62 594 aaPredicted RBP13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 FIG4Q92562 907 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 PRPF18Q99633 342 aaKnown RBP13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 DPY30Q9C005 99 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 RUBCNLQ9H714 662 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 MCCC2Q9HCC0 563 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 UBQLN4Q9NRR5 601 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 MED17Q9NVC6 651 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 ICAM5Q9UMF0 924 aa13.16□□□□□ -0.3
PPP1CA-201ENST00000312989 HRNRQ86YZ3 2850 aaPredicted RBP13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 RNF103-CHMP3A0A140T963 221 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 DVL2O14641 736 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 NDUFB5O43674 189 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 ZNF17P17021 662 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 RNF144AP50876 292 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms