RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 OR4E2Q8NGC2 313 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 SYT17Q9BSW7 474 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 WDR26Q9H7D7 661 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 USP36Q9P275 1121 aaKnown RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 DOCK1Q14185 1865 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3DA0A087WVF3 549 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3IA0A087WXS9 549 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3EA0A087X179 549 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3KA0A087X1G2 549 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 A0A1W2PQ45 241 aaPredicted RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 A0A1W2PQY0 241 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 CIB4A0PJX0 185 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 C1orf226A1L170 272 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3FA6NER0 549 aaPredicted RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3LB9A6J9 549 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 PRAMEF4O60810 478 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 PPP1R3DO95685 299 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 RAF1P04049 648 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 IFNA6P05013 189 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3HP0C7X1 549 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 PSMB10P40306 273 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 PRAMEF9Q5VWM5 478 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3GQ6DHY5 549 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3CQ6IPX1 549 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 FAM83HQ6ZRV2 1179 aaPredicted RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 PRSS45Q7RTY3 260 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 LRRC56Q8IYG6 542 aaPredicted RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TBC1D3Q8IZP1 549 aaPredicted RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 ZNF527Q8NB42 609 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 OR4C15Q8NGM1 316 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 CPEB1Q9BZB8 566 aaKnown RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TRPV4Q9HBA0 871 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 KLHL9Q9P2J3 617 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 BLOC1S5-TXNDC5H3BN57 136 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 CACNB4O00305 520 aaPredicted RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 CASC3O15234 703 aaKnown RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 HRO43593 1189 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 B3GALT2O43825 422 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 GTF2F2P13984 249 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 AK4P27144 223 aaPredicted RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 ITPKBP27987 946 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 RPL35P42766 123 aaKnown RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 BTG1P62324 171 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TAGLNQ01995 201 aaKnown RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TAF13Q15543 124 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 C6orf132Q5T0Z8 1188 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 PRAMEF17Q5VTA0 474 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 CFAP77Q6ZQR2 320 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TMC8Q8IU68 726 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 BOLLQ8N9W6 283 aaKnown RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 OR56B4Q8NH76 319 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TM4SF18Q96CE8 201 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 RNF208Q9H0X6 261 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 TMEM185BQ9H7F4 350 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 A4GALTQ9NPC4 353 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 SLC39A1Q9NY26 324 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 NOP16Q9Y3C1 178 aaKnown RBP12.63□□□□□ -0.39
SEC23A-201ENST00000307712 ZNF831Q5JPB2 1677 aa12.63□□□□□ -0.39
SEC23A-201ENST00000307712 ATP6V1G2-DDX39BF2Z307 99 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 NARSO43776 548 aaKnown RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 IGHA2P01877 340 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 SYPP08247 313 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 RBMS1P29558 406 aaKnown RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 GRK6P43250 576 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 SKP1P63208 163 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 ACTC1P68032 377 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 ACTA1P68133 377 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 SIM1P81133 766 aaPredicted RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 RAB12Q6IQ22 244 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 C17orf99Q6UX52 265 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 HDDC3Q8N4P3 179 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 OR5M3Q8NGP4 307 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 HS6ST2Q96MM7 605 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 DDOQ99489 341 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 GSX2Q9BZM3 304 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 NARFLQ9H6Q4 476 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 SYNPO2LQ9H987 977 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 EMC7Q9NPA0 242 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 UPB1Q9UBR1 384 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 NPIPA5A0A0B4J1W7 369 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 NPIPA7E9PJI5 369 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 PLPP1O14494 284 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 PLA2G10O15496 165 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 DPM1O60762 260 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 NPIPA8P0DM63 369 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 PUM1Q14671 1186 aaKnown RBP eCLIP12.62□□□□□ -0.399e-6■■■■□ 23.7
SEC23A-201ENST00000307712 ZNF750Q32MQ0 723 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 DEFB134Q4QY38 66 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 TCTE1Q5JU00 501 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 FAM27D1Q5T7N8 215 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 OR2A12Q8NGT7 310 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 OR5J2Q8NH18 312 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 OR14C36Q8NHC7 312 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 THAP4Q8WY91 577 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 SGTBQ96EQ0 304 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 FBXL3Q9UKT7 428 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 ZC3H12DA2A288 527 aaKnown RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 A8MVJ9 347 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 STK25O00506 426 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 TACSTD2P09758 323 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms