RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 IRF2P14316 349 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 HADHBP55084 474 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 MRPS34P82930 218 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 NDUFAF7Q7L592 441 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 TCEAL8Q8IYN2 117 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 STEAP2Q8NFT2 490 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 OR4Q3Q8NH05 313 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 RRNAD1Q96FB5 475 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 SLC30A3Q99726 388 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 HCFC1R1Q9NWW0 138 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 ADAM18Q9Y3Q7 739 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 MYADML2A6NDP7 307 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 CHRNB1P11230 501 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 IL4RP24394 825 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 CHATP28329 748 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 MAT1AQ00266 395 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 TMEM164Q5U3C3 297 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 GLCCI1Q86VQ1 547 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 FAM174AQ8TBP5 190 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 THSD1Q9NS62 852 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 A0A1W2PQU0 124 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 FAM155AB1AL88 458 aaPredicted RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 BET1O15155 118 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 CCL5P13501 91 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 BPIP17213 487 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 RHCEP18577 417 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 SHMT2P34897 504 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 RACK1P63244 317 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 NKX3-2P78367 333 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 SLC35G1Q2M3R5 365 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 ZNF852Q6ZMS4 543 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 KLHDC8AQ8IYD2 350 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 PARP16Q8N5Y8 322 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 OR5M1Q8NGP8 315 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 POP5Q969H6 163 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 ZNF845Q96IR2 970 aaPredicted RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 KCNK13Q9HB14 408 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 IGSF5Q9NSI5 407 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 RASD1Q9Y272 281 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 EMC8O43402 210 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 DIRAS3O95661 229 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 DNAJB13P59910 316 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 OR9K2Q8NGE7 335 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 NTAN1Q96AB6 310 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 C3orf30Q96M34 536 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 CCDC32Q9BV29 185 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 BTBD2Q9BX70 525 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 LTN1O94822 1766 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 SHPRHQ149N8 1683 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 AIPO00170 330 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 HSD17B6O14756 317 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 SOX15O60248 233 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 RFPL3O75679 317 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 IFNA4P05014 189 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 ITGB2P05107 769 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 P2RX3P56373 397 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 TESK1Q15569 626 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 SLC18B1Q6NT16 456 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 BLOC1S3Q6QNY0 202 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 DTWD1Q8N5C7 304 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 BRI3BPQ8WY22 251 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 KLHDC7BQ96G42 594 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 FAXDC2Q96IV6 333 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 FAM103A1Q9BTL3 118 aaKnown RBP11.93□□□□□ -0.5
USP38-201ENST00000307017 YTHDF1Q9BYJ9 559 aaKnown RBP11.93□□□□□ -0.5
USP38-201ENST00000307017 ACSL5Q9ULC5 683 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 PRSS21Q9Y6M0 314 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 PFKMP08237 780 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 PSPHP78330 225 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 ARG2P78540 354 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 FKBP1CQ5VVH2 108 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 NXPE4Q6UWF7 544 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 SLC35D2Q76EJ3 337 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 ZNF599Q96NL3 588 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 SNX18Q96RF0 628 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 AIG1Q9NVV5 245 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 RRASP10301 218 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 HOXD8P13378 290 aaPredicted RBP11.93□□□□□ -0.5
USP38-201ENST00000307017 UGT2B10P36537 528 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 SOWAHCQ53LP3 525 aaPredicted RBP11.93□□□□□ -0.5
USP38-201ENST00000307017 PRSS45Q7RTY3 260 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 LAX1Q8IWV1 398 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 TEX26Q8N6G2 289 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 ACVR1CQ8NER5 493 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 OR5P2Q8WZ92 322 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 CRB3Q9BUF7 120 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 TSPAN11A1L157 253 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 PMP2P02689 132 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 PVRP15151 417 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 MYF6P23409 242 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 HTR1EP28566 365 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 NOGQ13253 232 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 UPP1Q16831 310 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 MICAQ29983 383 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 PLCXD3Q63HM9 321 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 TBPL2Q6SJ96 375 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 IL17RCQ8NAC3 791 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 DENND1AQ8TEH3 1009 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 PIGCQ92535 297 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 GLYATL1Q969I3 302 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms