RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 WLSQ5T9L3 541 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 C1QL3Q5VWW1 255 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CD163Q86VB7 1156 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 IFNEQ86WN2 208 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ZNF619Q8N2I2 560 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 TMCO5AQ8N6Q1 288 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 WDSUB1Q8N9V3 476 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 FAM83FQ8NEG4 500 aaPredicted RBP10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 OR4C3Q8NH37 302 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 NEIL3Q8TAT5 605 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 TRNT1Q96Q11 434 aaKnown RBP10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 UBQLN3Q9H347 655 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 DSN1Q9H410 356 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 PLSCR2Q9NRY7 297 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SUCOQ9UBS9 1254 aaKnown RBP10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 FBXL2Q9UKC9 423 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 MKLN1Q9UL63 735 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 DTNAQ9Y4J8 743 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ZNF462Q96JM2 2506 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 NBASA2RRP1 2371 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 FIGNL2A6NMB9 653 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 C5orf58C9J3I9 102 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SNX3O60493 162 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 AGFG2O95081 481 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 H6PDO95479 791 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 NUDT14O95848 222 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 GUSBP08236 651 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 STSP08842 583 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 UBL4AP11441 157 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 HK1P19367 917 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 TCEA1P23193 301 aaKnown RBP10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 DPP4P27487 766 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 MSX1P28360 303 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CA7P43166 264 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CRISP3P54108 245 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 FUT5Q11128 374 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CYLC2Q14093 348 aaPredicted RBP10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 RGNQ15493 299 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SYPL1Q16563 259 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 C4orf17Q53FE4 359 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 EIPR1Q53HC9 387 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 COQ5Q5HYK3 327 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 WIPI1Q5MNZ9 446 aaPredicted RBP10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 PDZK1Q5T2W1 519 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 GCNT6Q5T4J0 391 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 RAET1LQ5VY80 246 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 REP15Q6BDI9 236 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 TYW3Q6IPR3 259 aaKnown RBP10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 AAGABQ6PD74 315 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 FRRS1Q6ZNA5 592 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 LRRC74BQ6ZQY2 392 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 YRDCQ86U90 279 aaKnown RBP10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SNX32Q86XE0 403 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 DPP10Q8N608 796 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 FADS6Q8N9I5 356 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 PCYOX1LQ8NBM8 494 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 OR2M3Q8NG83 312 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 FAM57AQ8TBR7 257 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 DUSP19Q8WTR2 217 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 OIT3Q8WWZ8 545 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 NTNG2Q96CW9 530 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SH3YL1Q96HL8 342 aaPredicted RBP10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SFXN2Q96NB2 322 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CGREF1Q99674 301 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 OR2B2Q9GZK3 357 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SLC52A3Q9NQ40 469 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 TAS2R10Q9NYW0 307 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 MED11Q9P086 117 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 VAPAQ9P0L0 249 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ARMCX1Q9P291 453 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ACAD8Q9UKU7 415 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SLC5A6Q9Y289 635 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 MYO7BQ6PIF6 2116 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 KALRNO60229 2985 aa10.01□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 A0A1B0GVC2 190 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 C17orf51A8MQB3 221 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 MRASO14807 208 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 HCRTR2O43614 444 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 TNFRSF21O75509 655 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CYP7B1O75881 506 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 WISP2O76076 250 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 C1QCP02747 245 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CHRM4P08173 479 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 HOXB9P17482 250 aaPredicted RBP10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CCR4P51679 360 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SUMO3P55854 103 aaPredicted RBP10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CD226Q15762 336 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ZNF141Q15928 474 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 C3AR1Q16581 482 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 TRMT5Q32P41 509 aaKnown RBP10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 KLHL26Q53HC5 615 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 MTFR2Q6P444 385 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ENPP6Q6UWR7 440 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 APOOLQ6UXV4 268 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 Q6ZPB1 254 aaPredicted RBP10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 OLIG3Q7RTU3 272 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 FJX1Q86VR8 437 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 PEX5LQ8IYB4 626 aa10□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 PM20D2Q8IYS1 436 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms