RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 BEND4Q6ZU67 534 aa15□□□□□ -0.01
USP42-201ENST00000306177 ZNF611Q8N823 705 aa15□□□□□ -0.01
USP42-201ENST00000306177 STOML3Q8TAV4 291 aa15□□□□□ -0.01
USP42-201ENST00000306177 ZMYND19Q96E35 227 aaPredicted RBP15□□□□□ -0.01
USP42-201ENST00000306177 OR7D2Q96RA2 312 aa15□□□□□ -0.01
USP42-201ENST00000306177 COL22A1Q8NFW1 1626 aaPredicted RBP15□□□□□ -0.01
USP42-201ENST00000306177 MEGF11A6BM72 1044 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 H0YIV9 168 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 RNF175Q8N4F7 328 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 UBTD2Q8WUN7 234 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 POT1Q9NUX5 634 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 TMPRSS11EQ9UL52 423 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 ABLIM3O94929 683 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 CPMP14384 443 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 FOLR3P41439 243 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 DAP3P51398 398 aaKnown RBP14.99□□□□□ -0.01
USP42-201ENST00000306177 ACTBP60709 375 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 ACTG1P63261 375 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 RIPPLY1Q0D2K3 151 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 NR0B2Q15466 257 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 ABHD17BQ5VST6 288 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 TMEM184AQ6ZMB5 413 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 NLGN4XQ8N0W4 816 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 SYNPOQ8N3V7 929 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 GDPD1Q8N9F7 314 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 UTP4Q969X6 686 aaKnown RBP14.99□□□□□ -0.01
USP42-201ENST00000306177 USP36Q9P275 1121 aaKnown RBP14.99□□□□□ -0.01
USP42-201ENST00000306177 COPZ2Q9P299 210 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 A0A1W2PQL4 384 aaPredicted RBP14.99□□□□□ -0.01
USP42-201ENST00000306177 ZNF850A8MQ14 1090 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 H3BMQ9 156 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 CREBL2O60519 120 aaPredicted RBP14.99□□□□□ -0.01
USP42-201ENST00000306177 THBS2P35442 1172 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 CXCL12P48061 93 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 PITPNBP48739 271 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 FOXK1P85037 733 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 RAB40BQ12829 278 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 GNMTQ14749 295 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 B3GNT7Q8NFL0 401 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 ABHD11Q8NFV4 315 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 OR5W2Q8NH69 310 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 COG8Q96MW5 612 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 CACNG6Q9BXT2 260 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 MGAT4CQ9UBM8 478 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 ZNF701M0R085 212 aaPredicted RBP14.99□□□□□ -0.01
USP42-201ENST00000306177 SLC33A1O00400 549 aaPredicted RBP14.99□□□□□ -0.01
USP42-201ENST00000306177 DNASE1P24855 282 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 CD38P28907 300 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 HBA1P69905 142 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 PTPRRQ15256 657 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 RNASE10Q5GAN6 216 aaKnown RBP14.99□□□□□ -0.01
USP42-201ENST00000306177 LYSMD4Q5XG99 296 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 LSMEM2Q8N112 164 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 LKAAEAR1Q8TD35 194 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 TMIGD2Q96BF3 282 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 BPIFA2Q96DR5 249 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 ZNF442Q9H7R0 627 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 FOLH1BQ9HBA9 442 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 KCNS2Q9ULS6 477 aa14.99□□□□□ -0.01
USP42-201ENST00000306177 IGLV3-10A0A075B6K4 115 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 BORCS7-ASMTA0A0B4J1R7 106 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 SYT7O43581 403 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 BCAS1O75363 584 aaPredicted RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 TP53I3Q53FA7 332 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 PIP5KL1Q5T9C9 394 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 IL17RCQ8NAC3 791 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 MFSD9Q8NBP5 474 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 CHDHQ8NE62 594 aaPredicted RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 TRMT10AQ8TBZ6 339 aaKnown RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 SLC25A44Q96H78 314 aaPredicted RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 MYADMQ96S97 322 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 LMF2Q9BU23 707 aaKnown RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 C1QTNF2Q9BXJ5 285 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 SAP130Q9H0E3 1048 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 KLHL9Q9P2J3 617 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 A6NLC8 198 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 FAM227AF5H4B4 570 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 OR7A17O14581 309 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 GPR75O95800 540 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 PVRP15151 417 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 SLC5A12Q1EHB4 618 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 ARSKQ6UWY0 536 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 SLC15A4Q8N697 577 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 UHRF1Q96T88 793 aaPredicted RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 DUSP23Q9BVJ7 150 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 BTBD2Q9BX70 525 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 TAAR2Q9P1P5 351 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 ENPP5Q9UJA9 477 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 FAM171A2A8MVW0 826 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 H3BML4 177 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 M0R036 132 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 DIRAS3O95661 229 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 IL7P13232 177 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 IMPA1P29218 277 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 YPEL5P62699 121 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 EIF2B1Q14232 305 aaKnown RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 EXOSC7Q15024 291 aaKnown RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 ATAD3CQ5T2N8 411 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 SLC22A10Q63ZE4 541 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms