RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MMABQ96EY8 250 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 C1QTNF2Q9BXJ5 285 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 CLMPQ9H6B4 373 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 SAGE1Q9NXZ1 904 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 LPLP06858 475 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 CHRNB1P11230 501 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 DGKEP52429 567 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ERVK-25P63136 954 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 GGTA1PQ4G0N0 100 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 C3orf38Q5JPI3 329 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 NDUFAF5Q5TEU4 345 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 FAM83FQ8NEG4 500 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 SSX3Q99909 188 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 FZD3Q9NPG1 666 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 SDHAF2Q9NX18 166 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 CNTRLQ7Z7A1 2325 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 OC90Q02509 493 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 KDM1BQ8NB78 822 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 OR51T1Q8NGJ9 327 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 FRS2Q8WU20 508 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 MAL2Q969L2 176 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 SLCO5A1Q9H2Y9 848 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ANKRD31Q8N7Z5 1873 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ARPC1BO15143 372 aaKnown RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ALDOBP05062 364 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 SPINT3P49223 89 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 DUSP3P51452 185 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 IL13RA1P78552 427 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 GALK2Q01415 458 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 TAGLNQ01995 201 aaKnown RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 MFGE8Q08431 387 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 HES5Q5TA89 166 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 GPR157Q5UAW9 335 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 FAM205BPQ63HN1 556 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 PM20D1Q6GTS8 502 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 OR5D14Q8NGL3 314 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 INTS14Q96SY0 518 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 MCOLN1Q9GZU1 580 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 HRASLS2Q9NWW9 162 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 KIAA0355O15063 1070 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 LCKP06239 509 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 HOXB2P14652 356 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 PTPN6P29350 595 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 LRP8Q14114 963 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 SGCAQ16586 387 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 CYP27C1Q4G0S4 372 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 LACC1Q8IV20 430 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 AUTS2Q8WXX7 1259 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 SLC30A3Q99726 388 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ALKBH4Q9NXW9 302 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ZNFX1Q9P2E3 1918 aaKnown RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 AGAP14A8MT82 685 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 HLA-AP01891 365 aaKnown RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 LAMP1P11279 417 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF791Q3KP31 576 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF648Q5T619 568 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 RPL22L1Q6P5R6 122 aaKnown RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 LARP4Q71RC2 724 aaKnown RBP eCLIP7.22□□□□□ -1.253e-9■□□□□ 9.5
SF3B3-201ENST00000302516 ABHD12BQ7Z5M8 362 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 GPR137CQ8N3F9 429 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 OR5M3Q8NGP4 307 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 KLK6Q92876 244 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 C3orf49Q96BT1 292 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 TEPSINQ96N21 525 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 SNX18Q96RF0 628 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 FAM212BQ9NTI7 297 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 CPNE7Q9UBL6 633 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 MYOCOSA0A1B0GUC4 107 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 TRAPPC2P0DI81 140 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 TRAPPC2BP0DI82 140 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 IRF2P14316 349 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 THBS3P49746 956 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 ERVPABLB-1P60509 514 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 SEMG2Q02383 582 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 EMX1Q04741 257 aaPredicted RBP7.21□□□□□ -1.25
SF3B3-201ENST00000302516 MLIPQ5VWP3 458 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 C14orf80Q86SX3 495 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 SULF2Q8IWU5 870 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 CMTM8Q8IZV2 173 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 RHOXF1Q8NHV9 184 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 SPRYD4Q8WW59 207 aaPredicted RBP7.21□□□□□ -1.25
SF3B3-201ENST00000302516 GTF2H4Q92759 462 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 ISG20Q96AZ6 181 aaKnown RBP7.21□□□□□ -1.25
SF3B3-201ENST00000302516 OR10A5Q9H207 317 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 OR10A2Q9H208 303 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 KCNK13Q9HB14 408 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 SEMA4GQ9NTN9 838 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 TMEM212A6NML5 194 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 GPRIN2O60269 458 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 BRINP1O60477 761 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 HPGDSO60760 199 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 DYRK1AQ13627 763 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 TAS1R3Q7RTX0 852 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 PDZD3Q86UT5 571 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 GLB1L2Q8IW92 636 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 UPRTQ96BW1 309 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 MMP28Q9H239 520 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 NIPAL2Q9H841 368 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 SCML1Q9UN30 329 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 ZCWPW2A0A1B0GU75 182 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms