RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 TBX5Q99593 518 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 KCNS3Q9BQ31 491 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 PRTFDC1Q9NRG1 225 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 COL4A2P08572 1712 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 A0A1W2PR77 199 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 SYT5O00445 386 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 MYL12BO14950 172 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 IGKV1D-16P01601 117 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 ETV5P41161 510 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 ETV1P50549 477 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 FAM53BQ14153 422 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 SMAD2Q15796 467 aaKnown RBP13.52□□□□□ -0.24
SMG8-201ENST00000300917 SSX1Q16384 188 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 OR4F15Q8NGB8 312 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 GNPDA2Q8TDQ7 276 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 ACOT11Q8WXI4 607 aaPredicted RBP13.52□□□□□ -0.24
SMG8-201ENST00000300917 GATAD2BQ8WXI9 593 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 FCGR1BQ92637 280 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 ZNF350Q9GZX5 532 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 SLC25A19Q9HC21 320 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 LRIT1Q9P2V4 623 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 RPL36Q9Y3U8 105 aaKnown RBP13.52□□□□□ -0.24
SMG8-201ENST00000300917 OR10H1Q9Y4A9 318 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 CLDN25C9JDP6 229 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 KIAA0513O60268 411 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 PLOD3O60568 738 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 KCNK2O95069 426 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 SAGP10523 405 aaPredicted RBP13.52□□□□□ -0.25
SMG8-201ENST00000300917 RNH1P13489 461 aaKnown RBP13.52□□□□□ -0.25
SMG8-201ENST00000300917 EEF1A1P68104 462 aaKnown RBP13.52□□□□□ -0.25
SMG8-201ENST00000300917 PSG6Q00889 435 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 C1orf189Q5VU69 101 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 SHISA6Q6ZSJ9 500 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 FNDC8Q8TC99 324 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 MARCH7Q9H992 704 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 PNO1Q9NRX1 252 aaKnown RBP13.52□□□□□ -0.25
SMG8-201ENST00000300917 WDFY3Q8IZQ1 3526 aa13.52□□□□□ -0.25
SMG8-201ENST00000300917 TRAV27A0A087WT01 109 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 SH3D21A4FU49 640 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 FAM221BA6H8Z2 402 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 HBQ1P09105 142 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 COX10Q12887 443 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 TSPAN31Q12999 210 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 SPHARQ15513 63 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 CYP4Z2PQ8N1L4 340 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 OR52I1Q8NGK6 324 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 SMAP2Q8WU79 429 aaPredicted RBP13.51□□□□□ -0.25
SMG8-201ENST00000300917 DTNBP1Q96EV8 351 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 RNFT2Q96EX2 444 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 OPALINQ96PE5 141 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 SLIRPQ9GZT3 109 aaKnown RBP13.51□□□□□ -0.25
SMG8-201ENST00000300917 A0A1B0GVT2 93 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 IFNGR2P38484 337 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 GCGRP47871 477 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 ARL4DP49703 201 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 SNRPGP62308 76 aaKnown RBP13.51□□□□□ -0.25
SMG8-201ENST00000300917 RACK1P63244 317 aaKnown RBP13.51□□□□□ -0.25
SMG8-201ENST00000300917 DESI1Q6ICB0 168 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 RANBP3LQ86VV4 465 aaPredicted RBP13.51□□□□□ -0.25
SMG8-201ENST00000300917 ZNF321PQ8N8H1 164 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 EFHD2Q96C19 240 aaPredicted RBP13.51□□□□□ -0.25
SMG8-201ENST00000300917 DGAT2Q96PD7 388 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 SMAD5Q99717 465 aaKnown RBP13.51□□□□□ -0.25
SMG8-201ENST00000300917 SYNDIG1Q9H7V2 258 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 GPR27Q9NS67 375 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 LRP4O75096 1905 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 CDC14CA4D256 554 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 LRRN3E7EW58 273 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 SOCS6O14544 535 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 GPX5O75715 221 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 MAKP20794 623 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 CDK5Q00535 292 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 IRF3Q14653 427 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 GXYLT1Q4G148 440 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 ZNF687Q8N1G0 1237 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 ANKK1Q8NFD2 765 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 OR13C2Q8NGS9 318 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 OR51Q1Q8NH59 317 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 TRMT61AQ96FX7 289 aaKnown RBP13.51□□□□□ -0.25
SMG8-201ENST00000300917 LRRN3Q9H3W5 708 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 FOLH1BQ9HBA9 442 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
SMG8-201ENST00000300917 RNF215Q9Y6U7 377 aa13.51□□□□□ -0.25
SMG8-201ENST00000300917 ARID1BQ8NFD5 2236 aaPredicted RBP13.5□□□□□ -0.25
SMG8-201ENST00000300917 SERPINI2O75830 405 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 AGR2O95994 175 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 SLC35E2P0CK97 266 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 NID1P14543 1247 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 RANBP1P43487 201 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 PLAURQ03405 335 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 KLHL12Q53G59 568 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 FAAH2Q6GMR7 532 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 PRR22Q8IZ63 422 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 RCBTB1Q8NDN9 531 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 TTTY10Q9BZA0 68 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 SPIN1Q9Y657 262 aaPredicted RBP13.5□□□□□ -0.25
SMG8-201ENST00000300917 CLCA3PQ9Y6N3 262 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 CDHR4A6H8M9 788 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 CHURC1-FNTBB4DL54 471 aa13.5□□□□□ -0.25
SMG8-201ENST00000300917 CCRL2O00421 344 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms