RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 COPS3Q9UNS2 423 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 MYOFQ9NZM1 2061 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 VWA8A3KMH1 1905 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 GMDSO60547 372 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 KHDRBS3O75525 346 aaKnown RBP13.72□□□□□ -0.21
COL6A2-201ENST00000300527 FGBP02675 491 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 RFX3P48380 749 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 HCCSP53701 268 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 PNLIPRP1P54315 467 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 C9orf64Q5T6V5 341 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 CACUL1Q86Y37 369 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 C17orf47Q8NEP4 570 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 CASD1Q96PB1 797 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 GINS4Q9BRT9 223 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 NEUROD4Q9HD90 331 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 FBXL2Q9UKC9 423 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 TRABD2BA6NFA1 517 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 FOXE1O00358 373 aaPredicted RBP13.71□□□□□ -0.21
COL6A2-201ENST00000300527 INPPL1O15357 1258 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 RBMS1P29558 406 aaKnown RBP13.71□□□□□ -0.21
COL6A2-201ENST00000300527 GBX2P52951 348 aaPredicted RBP13.71□□□□□ -0.21
COL6A2-201ENST00000300527 ZP1P60852 638 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 DEFA5Q01523 94 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 TCEA2Q15560 299 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 DUSP6Q16828 381 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 SLC36A2Q495M3 483 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 C17orf64Q86WR6 236 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 YIPF5Q969M3 257 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 SGTBQ96EQ0 304 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 DPH1Q9BZG8 443 aa13.71□□□□□ -0.21
COL6A2-201ENST00000300527 SLC5A10A0PJK1 596 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 LRRN3E7EW58 273 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 K7ESM1 405 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 EPPINO95925 133 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 CLTBP09497 229 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 TRHRP34981 398 aaPredicted RBP13.71□□□□□ -0.22
COL6A2-201ENST00000300527 FLT3LGP49771 235 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 CLDN12P56749 244 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 UBE2MP61081 183 aaKnown RBP13.71□□□□□ -0.22
COL6A2-201ENST00000300527 TRAM2Q15035 370 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 PGGHGQ32M88 737 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 OR2T4Q8NH00 348 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 ADAMTS14Q8WXS8 1223 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 C4orf36Q96KX1 117 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 HCAR1Q9BXC0 346 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 C20orf85Q9H1P6 137 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 LRRN3Q9H3W5 708 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 GLIPR2Q9H4G4 154 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 TRIM36Q9NQ86 728 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 SPG21Q9NZD8 308 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 KCMF1Q9P0J7 381 aa13.71□□□□□ -0.22
COL6A2-201ENST00000300527 MEIKINA0A087WXM9 373 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 TOR1AO14656 332 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 UCHL1P09936 223 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 CLUP10909 449 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 NPR2P20594 1047 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 OR12D2P58182 307 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 SIM1P81133 766 aaPredicted RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 ENTPD8Q5MY95 495 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 KHDRBS2Q5VWX1 349 aaKnown RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 CAPN10Q9HC96 672 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 RPS6KB2Q9UBS0 482 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 KDM4EB2RXH2 506 aaPredicted RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 SURF4O15260 269 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 RAB3BP20337 219 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 GDNFP39905 211 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 MTNR1BP49286 362 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 TSPAN31Q12999 210 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 ACSM3Q53FZ2 586 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 AADACL4Q5VUY2 407 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 GET4Q7L5D6 327 aaPredicted RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 ADGRG3Q86Y34 549 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 TMEM25Q86YD3 366 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 STPG2Q8N412 459 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 THAP4Q8WY91 577 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 MCHR1Q99705 422 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 NFKBIL1Q9UBC1 381 aaPredicted RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 PFDN2Q9UHV9 154 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 HELZP42694 1942 aaKnown RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 CASP8AP2Q9UKL3 1982 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 A0A1B0GVI7 797 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 A0A1W2PRU2 124 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 CTGFP29279 349 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 MMP12P39900 470 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 RPL35P42766 123 aaKnown RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 RAD52P43351 418 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 FNTBP49356 437 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 PSMA6P60900 246 aaKnown RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 MELKQ14680 651 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 HES5Q5TA89 166 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 OR5M10Q6IEU7 315 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 NHLRC1Q6VVB1 395 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 TMCO2Q7Z6W1 182 aaPredicted RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 GPAT4Q86UL3 456 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 IL17RCQ8NAC3 791 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 OR2T33Q8NG76 320 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 ZNF461Q8TAF7 563 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 ABHD4Q8TB40 342 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms