RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TRMT10AQ8TBZ6 339 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 WFDC5Q8TCV5 224 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 FKBP10Q96AY3 582 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 PRAP1Q96NZ9 151 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 B3GAT2Q9NPZ5 323 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 PRODH2Q9UF12 536 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 NCOR1O75376 2440 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 CLDN24A6NM45 220 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 ARPC5O15511 151 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 TSPAN6O43657 245 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 RPS5P46782 204 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 EMX1Q04741 257 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 GK2Q14410 553 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF791Q3KP31 576 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 FAM109AQ8N4B1 249 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 HAVCR2Q8TDQ0 301 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 GLYATL1Q969I3 302 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 FAM46BQ96A09 425 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 SGTBQ96EQ0 304 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 TOE1Q96GM8 510 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 TMEM19Q96HH6 336 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 TREX2Q9BQ50 279 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 G6PC3Q9BUM1 346 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF436Q9C0F3 470 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZBTB20Q9HC78 741 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 CACNG2Q9Y698 323 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 GPR89AB7ZAQ6 455 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 PHYHO14832 338 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 KHNYNO15037 678 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 CDK1P06493 297 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 GPR89BP0CG08 455 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 HMGCLP35914 325 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 KCNC1P48547 511 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 PGGT1BP53609 377 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 SELENOWP63302 87 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 MEF2AQ02078 507 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 LRIF1Q5T3J3 769 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 FAM69AQ5T7M9 428 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 ALKBH2Q6NS38 261 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF529Q6P280 563 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF300Q96RE9 604 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR51E2Q9H255 320 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 RXFP3Q9NSD7 469 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 SULT1C2O00338 296 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 RNF13O43567 381 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 RAD51DO75771 328 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 COL9A1P20849 921 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 SDHBP21912 280 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 RPL10P27635 214 aaKnown RBP11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 SHMT2P34897 504 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 CTSOP43234 321 aaPredicted RBP11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 MECP2P51608 486 aaKnown RBP11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 ARL6IP1Q15041 203 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 KRBOX4Q5JUW0 171 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF648Q5T619 568 aaPredicted RBP11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 CPZQ66K79 652 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 GPAT4Q86UL3 456 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 TRAM1L1Q8N609 369 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 LOXL4Q96JB6 756 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 GPRC5BQ9NZH0 403 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 MEGF11A6BM72 1044 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 CSTAP01040 98 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 CD3GP09693 182 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 H2BFMP0C1H6 154 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 HNF1BP35680 557 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 RGS6P49758 472 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 GPR19Q15760 415 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 CLECL1Q8IZS7 167 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 ANKK1Q8NFD2 765 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC7A13Q8TCU3 470 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 NMNAT1Q9HAN9 279 aaPredicted RBP11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 POT1Q9NUX5 634 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 HIF3AQ9Y2N7 669 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 A0A1W2PQ09 198 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 EEF1E1-BLOC1S5C9J1V9 151 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 F5H5P2 479 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 LEFTY1O75610 366 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC22A5O76082 557 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 AMY2AP04746 511 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 LAMP1P11279 417 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 AMY2BP19961 511 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 PRSS3P35030 304 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 PCGF2P35227 344 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 CSNK1DP48730 415 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 PTH2RP49190 550 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 HSD11B2P80365 405 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 SEMA3BQ13214 749 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 RAB11BQ15907 218 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 TMEM35AQ53FP2 167 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 SERPINA11Q86U17 422 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR4K17Q8NGC6 315 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 FAM174AQ8TBP5 190 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 TMEM234Q8WY98 164 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 ECHDC3Q96DC8 303 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 CNTNAP3BQ96NU0 1288 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 RDH14Q9HBH5 336 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 R4GN57 208 aa11.15□□□□□ -0.62
SYNGAP1-201ENST00000293748 A8MUA0 341 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 STATHP02808 62 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms