RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 DDX5P17844 614 aaKnown RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 CPOXP36551 454 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 FRKP42685 505 aaPredicted RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 CCT3P49368 545 aaKnown RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 PRIM2P49643 509 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 LHX2P50458 406 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 RPL14P50914 215 aaKnown RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 ZNF136P52737 540 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 TPD52P55327 224 aaPredicted RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 DSCR4P56555 118 aaPredicted RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 SIRPAP78324 504 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 PSPHP78330 225 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 POU6F2P78424 691 aaPredicted RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 MAD2L1Q13257 205 aaPredicted RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 NDUFAF6Q330K2 333 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 SLC25A35Q3KQZ1 300 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 NSUN5P2Q63ZY6 315 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 CDC73Q6P1J9 531 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 AAGABQ6PD74 315 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 ARSKQ6UWY0 536 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 APOOLQ6UXV4 268 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 P4HA3Q7Z4N8 544 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 ALDH16A1Q8IZ83 802 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 TMCO5AQ8N6Q1 288 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 OR5D16Q8NGK9 328 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 OR4A15Q8NGL6 344 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 OR6Y1Q8NGX8 325 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 DUSP19Q8WTR2 217 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 INTS12Q96CB8 462 aaKnown RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 NTNG2Q96CW9 530 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 MTERF3Q96E29 417 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 ARSGQ96EG1 525 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 PGM2Q96G03 612 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 ZNF764Q96H86 408 aaPredicted RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 ZNF559Q9BR84 538 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 DPY30Q9C005 99 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 TMEM185BQ9H7F4 350 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 SDHAF3Q9NRP4 125 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 ATAD3AQ9NVI7 634 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 FAF1Q9UNN5 650 aaPredicted RBP8.85□□□□□ -0.99
CCDC58-201ENST00000291458 KCNE3Q9Y6H6 103 aa8.85□□□□□ -0.99
CCDC58-201ENST00000291458 FAM47E-STBD1D6RA91 191 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 SCDO00767 359 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 NDUFB5O43674 189 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 ZIC3O60481 467 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 HOXD4P09016 255 aaPredicted RBP8.84□□□□□ -0.99
CCDC58-201ENST00000291458 PRPS1L1P21108 318 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 ATP6V1C1P21283 382 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 SSTR2P30874 369 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 CPA2P48052 419 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 ASCL1P50553 236 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 CCR4P51679 360 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 GFRA1P56159 465 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 DLX5P56178 289 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 CLDN18P56856 261 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 HBA1P69905 142 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 EMX2Q04743 252 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 FOXF2Q12947 444 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 OCLNQ16625 522 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 NHSL2Q5HYW2 709 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 NXNQ6DKJ4 435 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 DNAJC14Q6Y2X3 702 aaPredicted RBP8.84□□□□□ -0.99
CCDC58-201ENST00000291458 CHMP1BQ7LBR1 199 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 LUZP2Q86TE4 346 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 LSRQ86X29 649 aaPredicted RBP8.84□□□□□ -0.99
CCDC58-201ENST00000291458 LURAP1LQ8IV03 231 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 WDR75Q8IWA0 830 aaKnown RBP8.84□□□□□ -0.99
CCDC58-201ENST00000291458 FADS6Q8N9I5 356 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 OR56A1Q8NGH5 318 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 OR4C3Q8NH37 302 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 RFWD2Q8NHY2 731 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 ADAMTS15Q8TE58 950 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 RNF138Q8WVD3 245 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 OR5P2Q8WZ92 322 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 C1GALT1C1Q96EU7 318 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 DTNBP1Q96EV8 351 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 SLC35G5Q96KT7 338 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 PRPF18Q99633 342 aaKnown RBP8.84□□□□□ -0.99
CCDC58-201ENST00000291458 NPAS1Q99742 590 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 SPOCK3Q9BQ16 436 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 KLHDC3Q9BQ90 382 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 G6PC3Q9BUM1 346 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 PINK1Q9BXM7 581 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 ENKD1Q9H0I2 346 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 PTGES2Q9H7Z7 377 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 NKIRAS1Q9NYS0 192 aa8.84□□□□□ -0.99
CCDC58-201ENST00000291458 UQCRHLA0A096LP55 91 aa8.83□□□□□ -1
CCDC58-201ENST00000291458 OR2M5A3KFT3 312 aa8.83□□□□□ -1
CCDC58-201ENST00000291458 MBD3L4A6NDZ8 208 aaPredicted RBP8.83□□□□□ -1
CCDC58-201ENST00000291458 MBD3L3A6NE82 208 aaPredicted RBP8.83□□□□□ -1
CCDC58-201ENST00000291458 MBD3L5A6NJ08 208 aaPredicted RBP8.83□□□□□ -1
CCDC58-201ENST00000291458 CD8B2A6NJW9 211 aa8.83□□□□□ -1
CCDC58-201ENST00000291458 TTC36A6NLP5 189 aa8.83□□□□□ -1
CCDC58-201ENST00000291458 OIP5O43482 229 aa8.83□□□□□ -1
CCDC58-201ENST00000291458 TNFRSF21O75509 655 aa8.83□□□□□ -1
CCDC58-201ENST00000291458 CYP7B1O75881 506 aa8.83□□□□□ -1
CCDC58-201ENST00000291458 SMNDC1O75940 238 aaKnown RBP eCLIP8.83□□□□□ -1
CCDC58-201ENST00000291458 NUDT14O95848 222 aa8.83□□□□□ -1
CCDC58-201ENST00000291458 PEPDP12955 493 aa8.83□□□□□ -1
CCDC58-201ENST00000291458 ZNF708P17019 499 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms