RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 GABRB3P28472 473 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 CD68P34810 354 aaPredicted RBP10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 ADPRHP54922 357 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 WNT4P56705 351 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 ERVPABLB-1P60509 514 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 CTBSQ01459 385 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 PUM1Q14671 1186 aaKnown RBP eCLIP10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 GDPD3Q7L5L3 318 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 C12orf45Q8N5I9 185 aaPredicted RBP10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 ARFGAP1Q8N6T3 406 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 CNTNAP3BQ96NU0 1288 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 PELOQ9BRX2 385 aaKnown RBP10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 POTEKPQ9BYX7 375 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 C11orf54Q9H0W9 315 aaPredicted RBP10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 HHATLQ9HCP6 504 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 ADAP2Q9NPF8 381 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 COPS3Q9UNS2 423 aa10.72□□□□□ -0.69
NPC1L1-201ENST00000289547 TNFRSF10CO14798 259 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 LDB2O43679 373 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 SC5DO75845 299 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 RGS9O75916 674 aaPredicted RBP10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 IGHEP01854 428 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 CD3GP09693 182 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 ALDOCP09972 364 aaKnown RBP10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 OPRD1P41143 372 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 RPS13P62277 151 aaKnown RBP10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 KIR2DS3Q14952 304 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 TRAM2Q15035 370 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 BAIAP2L2Q6UXY1 529 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 PDZD3Q86UT5 571 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 AGBL5Q8NDL9 886 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 GPR26Q8NDV2 337 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 TRMT10AQ8TBZ6 339 aaKnown RBP10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 SLC22A8Q8TCC7 542 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 EDEM2Q9BV94 578 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 ARRDC1-AS1Q9H2J1 176 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 RBFOX1Q9NWB1 397 aaKnown RBP10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 DLGAP4Q9Y2H0 992 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 OARD1Q9Y530 152 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 COL11A1P12107 1806 aaPredicted RBP10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 GIMD1P0DJR0 217 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 ARSBP15848 533 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 TUBG1P23258 451 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 MAGEA6P43360 314 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 ZXDAP98168 799 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 EIPR1Q53HC9 387 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 IQCF1Q8N6M8 205 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 IL17RCQ8NAC3 791 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 FKBP10Q96AY3 582 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 MRGPRX1Q96LB2 322 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 SSX3Q99909 188 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 HOXD1Q9GZZ0 328 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 QRSL1Q9H0R6 528 aaKnown RBP10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 GALNT9Q9HCQ5 603 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 GPR45Q9Y5Y3 372 aa10.71□□□□□ -0.69
NPC1L1-201ENST00000289547 ARPC1BO15143 372 aaKnown RBP10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 FOSL1P15407 271 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 MMP12P39900 470 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 P2RX3P56373 397 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 TMEM196Q5HYL7 178 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 SUSD1Q6UWL2 747 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 CLECL1Q8IZS7 167 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 TEX26Q8N6G2 289 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 CSNK1A1LQ8N752 337 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 COX18Q8N8Q8 333 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 JSRP1Q96MG2 331 aaPredicted RBP10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 GORASP2Q9H8Y8 452 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 PTTG3PQ9NZH4 202 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 PCTPQ9UKL6 214 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 SPO11Q9Y5K1 396 aa10.71□□□□□ -0.7
NPC1L1-201ENST00000289547 EEF1E1-BLOC1S5C9J1V9 151 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 LRRTM2O43300 516 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 GATBO75879 557 aaKnown RBP10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 ADAP00813 363 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 ETFAP13804 333 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 ZNF33BQ06732 778 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 FCN2Q15485 313 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 NKAPLQ5M9Q1 402 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 WDSUB1Q8N9V3 476 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 GRHL3Q8TE85 626 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 INPP5KQ9BT40 448 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 METTL17Q9H7H0 456 aaPredicted RBP10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 SDHAF3Q9NRP4 125 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 INIPQ9NRY2 104 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 CPNE7Q9UBL6 633 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 GPR52Q9Y2T5 361 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 GOSR2O14653 212 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 LCMT2O60294 686 aaKnown RBP10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 RBMXL2O75526 392 aaKnown RBP10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 ACPPP15309 386 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 FDXRP22570 491 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 APEX1P27695 318 aaKnown RBP10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 PTH2RP49190 550 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 TGM4P49221 684 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 OPCMLQ14982 345 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 MANEALQ5VSG8 457 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 FIGLAQ6QHK4 219 aa10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 Q6ZPB1 254 aaPredicted RBP10.7□□□□□ -0.7
NPC1L1-201ENST00000289547 ARRDC2Q8TBH0 407 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms