RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 Q6ZNX1 250 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 RANBP3LQ86VV4 465 aaPredicted RBP17.89■□□□□ 0.45
BRAF-201ENST00000288602 MFSD4AQ8N468 514 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 POGLUT1Q8NBL1 392 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 NR4A3Q92570 626 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 MMABQ96EY8 250 aaPredicted RBP17.89■□□□□ 0.45
BRAF-201ENST00000288602 ANKRD19PQ9H560 264 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 GPX5O75715 221 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 IGKV1D-16P01601 117 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 FPR3P25089 353 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 MLLT3P42568 568 aaPredicted RBP17.88■□□□□ 0.45
BRAF-201ENST00000288602 PGDP52209 483 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 FLYWCH1Q4VC44 716 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 PDZK1Q5T2W1 519 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 HSDL2Q6YN16 418 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 NANOGP1Q8N7R0 232 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 GRHL3Q8TE85 626 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 TCTN2Q96GX1 697 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 TAPBPLQ9BX59 468 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 POLR2J2Q9GZM3 115 aaKnown RBP17.88■□□□□ 0.45
BRAF-201ENST00000288602 SPRTNQ9H040 489 aaPredicted RBP17.88■□□□□ 0.45
BRAF-201ENST00000288602 EXOSC4Q9NPD3 245 aaKnown RBP17.88■□□□□ 0.45
BRAF-201ENST00000288602 FBXL21Q9UKT6 434 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 MAU2Q9Y6X3 613 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 MUC3AQ02505 3323 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 HYKKA2RU49 373 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 AQP9O43315 295 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 RNH1P13489 461 aaKnown RBP17.88■□□□□ 0.45
BRAF-201ENST00000288602 UGT2B10P36537 528 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 EMDP50402 254 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 LIMK1P53667 647 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 RACK1P63244 317 aaKnown RBP17.88■□□□□ 0.45
BRAF-201ENST00000288602 IFITM3Q01628 133 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 ZNF404Q494X3 552 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 PERM1Q5SV97 790 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 CYP4Z2PQ8N1L4 340 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 ANKK1Q8NFD2 765 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 SNRNP27Q8WVK2 155 aaKnown RBP17.88■□□□□ 0.45
BRAF-201ENST00000288602 RNFT2Q96EX2 444 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 SAMD8Q96LT4 415 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 MND1Q9BWT6 205 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 ENKD1Q9H0I2 346 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 FBXO8Q9NRD0 319 aa17.88■□□□□ 0.45
BRAF-201ENST00000288602 TESQ9UGI8 421 aaKnown RBP17.88■□□□□ 0.45
BRAF-201ENST00000288602 STK25O00506 426 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 LRRTM2O43300 516 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 KLF4O43474 513 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 SRPX2O60687 465 aaPredicted RBP17.87■□□□□ 0.45
BRAF-201ENST00000288602 ADAM11O75078 769 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 SCG5P05408 212 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 RHAGQ02094 409 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 ZNF267Q14586 743 aaPredicted RBP17.87■□□□□ 0.45
BRAF-201ENST00000288602 OR2G6Q5TZ20 316 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 SLC36A4Q6YBV0 504 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 SIX5Q8N196 739 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 CNOT9Q92600 299 aaKnown RBP17.87■□□□□ 0.45
BRAF-201ENST00000288602 OTULINQ96BN8 352 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 RNF31Q96EP0 1072 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 SPACA7Q96KW9 195 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 PTCHD1Q96NR3 888 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 CNPPD1Q9BV87 410 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 RERGLQ9H628 205 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 FOLH1BQ9HBA9 442 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 IL20Q9NYY1 176 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 CSNK1G3Q9Y6M4 447 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 TRAPPC13A5PLN9 417 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 METTL15A6NJ78 407 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 MYL12BO14950 172 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 HRO43593 1189 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 NKX2-2O95096 273 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 MYF5P13349 255 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 MAKP20794 623 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 TUBA1BP68363 451 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 LRIT3Q3SXY7 679 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 LIPKQ5VXJ0 399 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 ZCCHC12Q6PEW1 402 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 C19orf48Q6RUI8 117 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 ZNF620Q6ZNG0 422 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 TUBA1AQ71U36 451 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 CENPSQ8N2Z9 138 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 BBS1Q8NFJ9 593 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 TRMT61AQ96FX7 289 aaKnown RBP17.87■□□□□ 0.45
BRAF-201ENST00000288602 SLC38A2Q96QD8 506 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 CDADC1Q9BWV3 514 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 PRO3102Q9H379 93 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 PRTFDC1Q9NRG1 225 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 CLDN16Q9Y5I7 305 aa17.87■□□□□ 0.45
BRAF-201ENST00000288602 FAM183AA6NL82 134 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 RAB36O95755 333 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 STAT5AP42229 794 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 GAS1P54826 345 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 SLC25A30Q5SVS4 291 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 PTCRAQ6ISU1 281 aaPredicted RBP17.86■□□□□ 0.45
BRAF-201ENST00000288602 B3GLCTQ6Y288 498 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 DCDC5Q6ZRR9 648 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 WDR12Q9GZL7 423 aaKnown RBP17.86■□□□□ 0.45
BRAF-201ENST00000288602 NLGN3Q9NZ94 848 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 SURF4O15260 269 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 PRODHO43272 600 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 BCKDHBP21953 392 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms