RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ZCCHC18P0CG32 403 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 IDO1P14902 403 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 CPN1P15169 458 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 DDX5P17844 614 aaKnown RBP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 BMP7P18075 431 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 CLNS1AP54105 237 aaKnown RBP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 PRKAG1P54619 331 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 RPP38P78345 283 aaKnown RBP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 PLGLB1Q02325 96 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 PLAURQ03405 335 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 LASP1Q14847 261 aaKnown RBP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 DECR1Q16698 335 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 PGS1Q32NB8 556 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 DCST1Q5T197 706 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 ANXA8L1Q5VT79 327 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 FIGNL1Q6PIW4 674 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 ANGPTL8Q6UXH0 198 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 MARCH3Q86UD3 253 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 ANKRD46Q86W74 232 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 MED12LQ86YW9 2145 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 GLB1L3Q8NCI6 653 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 FAM83FQ8NEG4 500 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 OR56A1Q8NGH5 318 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 OR9I1Q8NGQ6 314 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 OR1J4Q8NGS1 313 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 GPR151Q8TDV0 419 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 LRRC8CQ8TDW0 803 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 DUSP19Q8WTR2 217 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 GTF2H4Q92759 462 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 CDS1Q92903 461 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 MOAP1Q96BY2 351 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 ZG16BQ96DA0 208 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 NEURL3Q96EH8 262 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 OR7D2Q96RA2 312 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 NPAS1Q99742 590 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 TREX2Q9BQ50 279 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 YIPF4Q9BSR8 244 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 SLC6A15Q9H2J7 730 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 TMEM45AQ9NWC5 275 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 TNFRSF10DQ9UBN6 386 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 NOTCH2Q04721 2471 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 HCFC1P51610 2035 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 CACNA1DQ01668 2161 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 DOCK7Q96N67 2140 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 TRBV5-3A0A0A0MS03 114 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 NPIPA2E9PIF3 369 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 NPIPA3F8WFD2 350 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ETV2O00321 342 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-201ENST00000288344 PRRG2O14669 202 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 BCKDKO14874 412 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 UBDO15205 165 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 FCMRO60667 390 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 SLC22A3O75751 556 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 IL6P05231 212 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ALOX5P09917 674 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 GLI4P10075 376 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 NID1P14543 1247 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 UQCRC2P22695 453 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 SRD5A2P31213 254 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 S100A3P33764 101 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ADH7P40394 386 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 PRIM2P49643 509 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 RBPJQ06330 500 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 TFF3Q07654 80 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF155Q12901 538 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ART3Q13508 389 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ARHGAP11BQ3KRB8 267 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 VPS26BQ4G0F5 336 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 WIPI1Q5MNZ9 446 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-201ENST00000288344 CCNJQ5T5M9 372 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 OR5M10Q6IEU7 315 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 XKRXQ6PP77 449 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 PAOXQ6QHF9 649 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 YRDCQ86U90 279 aaKnown RBP8.3□□□□□ -1.08
HMGN1-201ENST00000288344 CD163Q86VB7 1156 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 MSRB3Q8IXL7 192 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 OR5D16Q8NGK9 328 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 OR5AK3PQ8NH89 298 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 RFWD2Q8NHY2 731 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ZFP90Q8TF47 636 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 SLC9A6Q92581 669 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF837Q96EG3 531 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-201ENST00000288344 OTUB1Q96FW1 271 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-201ENST00000288344 RMND5BQ96G75 393 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF317Q96PQ6 595 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-201ENST00000288344 TTYH2Q9BSA4 534 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 UGT2B28Q9BY64 529 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 C12orf49Q9H741 205 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 METTL7AQ9H8H3 244 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 EQTNQ9NQ60 294 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 UBQLN4Q9NRR5 601 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 OR10H1Q9Y4A9 318 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 ABCA12Q86UK0 2595 aa8.3□□□□□ -1.08
HMGN1-201ENST00000288344 CENPVL1A0A0U1RR11 272 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 CCDC154A6NI56 674 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 AHRRA9YTQ3 701 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 HMGN4O00479 90 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 OIP5O43482 229 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms