RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CYP4B1P13584 511 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 TNFRSF1BP20333 461 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 OR1E2P47887 323 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 MLF1P58340 268 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 EEF1A1P68104 462 aaKnown RBP17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 LYPD8Q6UX82 237 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 ZNF836Q6ZNA1 936 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 SNIP1Q8TAD8 396 aaKnown RBP17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 THOC3Q96J01 351 aaKnown RBP17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 ZNF184Q99676 751 aaPredicted RBP17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 COQ10BQ9H8M1 238 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 RYDENQ9NUL5 291 aaKnown RBP17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 OAZ3Q9UMX2 235 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 C15orf41Q9Y2V0 281 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 YARS2Q9Y2Z4 477 aaKnown RBP17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 SAC3D1A6NKF1 404 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 CLDN24A6NM45 220 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 hCG_2039718K7EN88 272 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 HS6ST1O60243 411 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 UGT2B11O75310 529 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 ADRB1P08588 477 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 TBXA2RP21731 343 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 TMED10P49755 219 aaKnown RBP17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 KCNC4Q03721 635 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 KLHL26Q53HC5 615 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 RNF220Q5VTB9 566 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 FCRLBQ6BAA4 426 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 DESI1Q6ICB0 168 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 COMTD1Q86VU5 262 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 CLIP4Q8N3C7 705 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 ZNF527Q8NB42 609 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 CLEC1AQ8NC01 280 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 BRIX1Q8TDN6 353 aaKnown RBP17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 DNAJC9Q8WXX5 260 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 PSMF1Q92530 271 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 SLC29A1Q99808 456 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 RLIMQ9NVW2 624 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 FLRT3Q9NZU0 649 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 DKK4Q9UBT3 224 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 SPTBN4Q9H254 2564 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 ASPMQ8IZT6 3477 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 ZNF891A8MT65 544 aaPredicted RBP17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 KLK10O43240 276 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 MAN1A2O60476 641 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 ICOSLGO75144 302 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 NGFRP08138 427 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 FBXO45P0C2W1 286 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 HPGDP15428 266 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 RRADP55042 308 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 AQP4P55087 323 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 EFR3AQ14156 821 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 EIPR1Q53HC9 387 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 ZNF614Q8N883 585 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 ARMC7Q9H6L4 198 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 KLHL28Q9NXS3 571 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 NDUFAF4Q9P032 175 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 SLC13A4Q9UKG4 626 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 SLC9A8Q9Y2E8 581 aa17.38■□□□□ 0.37
PDLIM3-202ENST00000284770 AKAP13Q12802 2813 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 SCDO00767 359 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 SOCS2O14508 198 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 OXSR1O95747 527 aaPredicted RBP17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 PRKAR1AP10644 381 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 FGFBP1Q14512 234 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 ZSWIM7Q19AV6 140 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 MRPL2Q5T653 305 aaKnown RBP17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 OR2T5Q6IEZ7 315 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 NUP54Q7Z3B4 507 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 SIRT6Q8N6T7 355 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 OR2T29Q8NH02 315 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 CCNL2Q96S94 520 aaPredicted RBP17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 VNN3Q9NY84 501 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 FREM2Q5SZK8 3169 aa17.37■□□□□ 0.37
PDLIM3-202ENST00000284770 CDHR4A6H8M9 788 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 PDLIM1O00151 329 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 DPM1O60762 260 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 DIRAS1O95057 198 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 IFNW1P05000 195 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 SOX3P41225 446 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 SSR4P51571 173 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 FBXW4P57775 412 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 NTRK2Q16620 822 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 NRF1Q16656 503 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 PPP4R4Q6NUP7 873 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 OPN5Q6U736 354 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 ZBTB49Q6ZSB9 765 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 CARM1Q86X55 608 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 CMIPQ8IY22 773 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 TTC9Q92623 222 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 HGDQ93099 445 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 TMCO6Q96DC7 493 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 SPACA9Q96E40 222 aaPredicted RBP17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 ARHGDIGQ99819 225 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 WFDC6Q9BQY6 131 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 C9orf16Q9BUW7 83 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 AMBRA1Q9C0C7 1298 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 LHPPQ9H008 270 aa17.36■□□□□ 0.37
PDLIM3-202ENST00000284770 SERINC4A6NH21 518 aa17.35■□□□□ 0.37
PDLIM3-202ENST00000284770 ARGFXA6NJG6 315 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms