RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GIPRP48546 466 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 MAN2A2P49641 1150 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 NCBP2P52298 156 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 CLDN20P56880 219 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 RIN1Q13671 783 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 UBXN2BQ14CS0 331 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 CD200R1LQ6Q8B3 271 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 ZNF767PQ75MW2 155 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 SYT13Q7L8C5 426 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 TAF8Q7Z7C8 310 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 TSTD1Q8NFU3 115 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 OR4D11Q8NGI4 311 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 TM9SF4Q92544 642 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 ZBED6CLQ96FA7 236 aaPredicted RBP17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 AMDHD1Q96NU7 426 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 SARGQ9BW04 601 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 RERGLQ9H628 205 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 SLC35C2Q9NQQ7 365 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 SLC2A4RGQ9NR83 387 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 CPNE7Q9UBL6 633 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 SEC14L3Q9UDX4 400 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 A4GNTQ9UNA3 340 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 YARS2Q9Y2Z4 477 aaKnown RBP17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 LOC105369274A0A096LPK9 316 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 LOC102723532A0A0G2JNH3 316 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 SPTY2D1-AS1A0A0U1RR47 76 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 TBX19O60806 448 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 FAM157BP0CG42 384 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 CCT3P49368 545 aaKnown RBP17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 PRKAG1P54619 331 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 CDK5Q00535 292 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 FCRL6Q6DN72 434 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 MRM1Q6IN84 353 aaKnown RBP17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 PODNL1Q6PEZ8 512 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 CNIH2Q6PI25 160 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 HMGN2P46Q86SG4 172 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 CCDC116Q8IYX3 515 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 OR4N4Q8N0Y3 316 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 ZNF687Q8N1G0 1237 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 GPBAR1Q8TDU6 330 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 DEDD2Q8WXF8 326 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 ORAI3Q9BRQ5 295 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 YIPF4Q9BSR8 244 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 TOR4AQ9NXH8 423 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 ACTR10Q9NZ32 417 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 EXOSC1Q9Y3B2 195 aaKnown RBP17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 MUC3AQ02505 3323 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 LYRM1O43325 122 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 GAAP10253 952 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 SMSP52788 366 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 OR2G6Q5TZ20 316 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 CREB3L2Q70SY1 520 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 TMEFF1Q8IYR6 380 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 SYT14Q8NB59 555 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 COMMD3Q9UBI1 195 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 CARD8Q9Y2G2 431 aa17.08■□□□□ 0.33
PDLIM3-201ENST00000284767 FAM240BA0A1B0GVZ2 78 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 TRDV1A0A1B0GX56 115 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 HMGN4O00479 90 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 PRODHO43272 600 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC43A1O75387 559 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 CRYZL1O95825 349 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 IGLV3-19P01714 112 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 IL9P15248 144 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 MMP11P24347 488 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 SUN3Q8TAQ9 357 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 SNAPC3Q92966 411 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 COQ7Q99807 217 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 MARVELD1Q9BSK0 173 aa17.08■□□□□ 0.32
PDLIM3-201ENST00000284767 PRAMEF27A3QJZ7 478 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 RAB25P57735 213 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 FABP5Q01469 135 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 FZD5Q13467 585 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 SF3A2Q15428 464 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 SMAD2Q15796 467 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 SIGIRRQ6IA17 410 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 ACSM5Q6NUN0 579 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC36A4Q6YBV0 504 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 TBC1D19Q8N5T2 526 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 GATAD2BQ8WXI9 593 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 RNFT2Q96EX2 444 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 OR2A5Q96R48 311 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 BBS4Q96RK4 519 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 TM9SF2Q99805 663 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 TMEM43Q9BTV4 400 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 PRRG3Q9BZD7 231 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 TRIM45Q9H8W5 580 aaPredicted RBP17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 PHF11Q9UIL8 331 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 ABCA7Q8IZY2 2146 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 A0A1W2PPC4 97 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 CASKO14936 926 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 ORC5O43913 435 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 OR12D1P0DN82 309 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 DRD2P14416 443 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 GSTM3P21266 225 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 CCR5P51681 352 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 PIN1Q13526 163 aaPredicted RBP17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 SNAPC1Q16533 368 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 ENTPD8Q5MY95 495 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 C1orf94Q6P1W5 598 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms