RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 RANBP3LQ86VV4 465 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-201ENST00000279247 SNX29P2Q8IUI4 249 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 CADM2Q8N3J6 435 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 SLC25A45Q8N413 288 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 ARHGEF39Q8N4T4 335 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 C1orf216Q8TAB5 229 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 C20orf141Q9NUB4 165 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 A0A087WV62 115 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 NID1P14543 1247 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 ACVR2AP27037 513 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 OPRL1P41146 370 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 OR1Q1Q15612 314 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 SLC27A4Q6P1M0 643 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 GNPDA2Q8TDQ7 276 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 ACOT11Q8WXI4 607 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-201ENST00000279247 NECTIN3Q9NQS3 549 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 CSNK1G3Q9Y6M4 447 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 LILRA5A6NI73 299 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 FAM183AA6NL82 134 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 DBIP07108 87 aaKnown RBP16.63■□□□□ 0.25
CAPN1-201ENST00000279247 IFNGR2P38484 337 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 OMPP47874 163 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 EMDP50402 254 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 SMSP52788 366 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 FAM53BQ14153 422 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 SYT14P1Q58G82 188 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 C16orf87Q6PH81 154 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 ARHGAP22Q7Z5H3 698 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 ZNF321PQ8N8H1 164 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 RELTQ969Z4 430 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 CTHRC1Q96CG8 243 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 ZDHHC12Q96GR4 267 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 MGLLQ99685 303 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 NLGN3Q9NZ94 848 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 TMEM131Q92545 1883 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 WWP2O00308 870 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 EMP3P54852 163 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 COX10Q12887 443 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 FCRLBQ6BAA4 426 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 BTLAQ7Z6A9 289 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 RCBTB1Q8NDN9 531 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 EFHD2Q96C19 240 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-201ENST00000279247 PLEKHA8Q96JA3 519 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 SAMD8Q96LT4 415 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 NELL2Q99435 816 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 OR8D2Q9GZM6 311 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 FKBP14Q9NWM8 211 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 GPR179Q6PRD1 2367 aa16.63■□□□□ 0.25
CAPN1-201ENST00000279247 CPED1A4D0V7 1026 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 HRO43593 1189 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 CTNSO60931 367 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 ADAM11O75078 769 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 IFI30P13284 250 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 CFHR1Q03591 330 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 C16orf52Q8NHV5 167 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 TSLPQ969D9 159 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 Q96MT0 163 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 CENPOQ9BU64 300 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 ATXN7L1Q9ULK2 861 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-201ENST00000279247 CDHR4A6H8M9 788 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 SLC22A1O15245 554 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 MAGEB3O15480 346 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 BRINP1O60477 761 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 NSA2O95478 260 aaKnown RBP16.62■□□□□ 0.25
CAPN1-201ENST00000279247 SAGP10523 405 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-201ENST00000279247 S1PR1P21453 382 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 SKP1P63208 163 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 TSPAN31Q12999 210 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 EIPR1Q53HC9 387 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 FAAH2Q6GMR7 532 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 FAM174AQ8TBP5 190 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 DCSTAMPQ9H295 470 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 CDC14CA4D256 554 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 SH3D21A4FU49 640 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 K7ESF4 209 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 KIAA0513O60268 411 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 SLITRK5O94991 958 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 GSTM3P21266 225 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 VWA2Q5GFL6 755 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 TMCO5AQ8N6Q1 288 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 OR51A7Q8NH64 312 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 NUDT22Q9BRQ3 303 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 CUTCQ9NTM9 273 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 ERGIC3Q9Y282 383 aa16.62■□□□□ 0.25
CAPN1-201ENST00000279247 CELSR3Q9NYQ7 3312 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 EML5Q05BV3 1969 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 IGHV1OR21-1A0A087WYE8 117 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 COQ9O75208 318 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 PLAURQ03405 335 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 NPSR1Q6W5P4 371 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 OR4Q3Q8NH05 313 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 FCGR1BQ92637 280 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 ABTB1Q969K4 478 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-201ENST00000279247 ZNF582Q96NG8 517 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-201ENST00000279247 STACQ99469 402 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 PLGRKTQ9HBL7 147 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 TRIM64BA6NI03 449 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 LRRTM2O43300 516 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 FOLR1P15328 257 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 CSF2RBP32927 897 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms