RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 OPN1LWP04000 364 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 THBDP07204 575 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 SDC1P18827 310 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 TBXA2RP21731 343 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 CRHR1P34998 444 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 FRKP42685 505 aaPredicted RBP13.68□□□□□ -0.22
SOD1-201ENST00000270142 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.68□□□□□ -0.22
SOD1-201ENST00000270142 CTU2Q2VPK5 515 aaKnown RBP13.68□□□□□ -0.22
SOD1-201ENST00000270142 VPS26BQ4G0F5 336 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 LIPMQ5VYY2 423 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 FIGNL1Q6PIW4 674 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 C20orf204Q6ZNR8 217 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 Q6ZSR9 355 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 YTHDF3Q7Z739 585 aaKnown RBP13.68□□□□□ -0.22
SOD1-201ENST00000270142 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 CDRT4Q8N9R6 151 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 OR4C3Q8NH37 302 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 OR10D3Q8NH80 312 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 CLHC1Q8NHS4 586 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 FAM110BQ8TC76 370 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 CAVIN3Q969G5 261 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 PPCDCQ96CD2 204 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 ARSGQ96EG1 525 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 OTUB1Q96FW1 271 aaPredicted RBP13.68□□□□□ -0.22
SOD1-201ENST00000270142 PERPQ96FX8 193 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 ZNF764Q96H86 408 aaPredicted RBP13.68□□□□□ -0.22
SOD1-201ENST00000270142 TSSK3Q96PN8 268 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 CCT7Q99832 543 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 KLHDC3Q9BQ90 382 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 PRRG4Q9BZD6 226 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 REEP4Q9H6H4 257 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 EMC9Q9Y3B6 208 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 FIS1Q9Y3D6 152 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 NAV3Q8IVL0 2385 aa13.68□□□□□ -0.22
SOD1-201ENST00000270142 MAP1AP78559 2803 aaPredicted RBP13.68□□□□□ -0.22
SOD1-201ENST00000270142 A0A087WZY1 265 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 UQCRHLA0A096LP55 91 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 A0A1W2PRB8 838 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 RGS14O43566 566 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 CXCL13O43927 109 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 TBX19O60806 448 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 SS18L1O75177 396 aaPredicted RBP13.67□□□□□ -0.22
SOD1-201ENST00000270142 KCNK2O95069 426 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 LY6G6DO95868 133 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 NGFRP08138 427 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 CPA3P15088 417 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 CCT5P48643 541 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 MANFP55145 182 aaKnown RBP13.67□□□□□ -0.22
SOD1-201ENST00000270142 RPL38P63173 70 aaKnown RBP13.67□□□□□ -0.22
SOD1-201ENST00000270142 SLC18A2Q05940 514 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 PDE7AQ13946 482 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 DUSP5Q16690 384 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 PRSS57Q6UWY2 283 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 C10orf107Q8IVU9 208 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 WDR75Q8IWA0 830 aaKnown RBP13.67□□□□□ -0.22
SOD1-201ENST00000270142 GTPBP8Q8N3Z3 284 aaPredicted RBP13.67□□□□□ -0.22
SOD1-201ENST00000270142 SLC16A11Q8NCK7 471 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 CEP70Q8NHQ1 597 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 ZFP28Q8NHY6 868 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 ZBED6CLQ96FA7 236 aaPredicted RBP13.67□□□□□ -0.22
SOD1-201ENST00000270142 SH3YL1Q96HL8 342 aaPredicted RBP13.67□□□□□ -0.22
SOD1-201ENST00000270142 GMPPAQ96IJ6 420 aaPredicted RBP13.67□□□□□ -0.22
SOD1-201ENST00000270142 RNF145Q96MT1 663 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 MS4A4EQ96PG1 132 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 TUBB1Q9H4B7 451 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 PLSCR4Q9NRQ2 329 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 MED17Q9NVC6 651 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 FBXO34Q9NWN3 711 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 SH3BP4Q9P0V3 963 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 NTMQ9P121 344 aa13.67□□□□□ -0.22
SOD1-201ENST00000270142 RAI1Q7Z5J4 1906 aaPredicted RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 TRIM64A6NGJ6 449 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 TRIM64BA6NI03 449 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 SMIM23A6NLE4 172 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 FAM171A2A8MVW0 826 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 TNFSF11O14788 317 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 AZIN1O14977 448 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 KLF4O43474 513 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 PLGP00747 810 aaPredicted RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 NEFHP12036 1026 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 EFNA1P20827 205 aaPredicted RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 PSMA4P25789 261 aaKnown RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 CTBP2P56545 445 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 PLPPR5Q32ZL2 321 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 RFTN2Q52LD8 501 aaPredicted RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 EXOSC6Q5RKV6 272 aaKnown RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 CCNJQ5T5M9 372 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 MFSD12Q6NUT3 480 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 STAC2Q6ZMT1 411 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 RNF165Q6ZSG1 346 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 OR2V1Q8NHB1 315 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 POC1BQ8TC44 478 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 ZBTB8AQ96BR9 441 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 C16orf58Q96GQ5 468 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 GATA5Q9BWX5 397 aaPredicted RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 TMEM185BQ9H7F4 350 aa13.66□□□□□ -0.22
SOD1-201ENST00000270142 ACSS1Q9NUB1 689 aaPredicted RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 PAQR5Q9NXK6 330 aaPredicted RBP13.66□□□□□ -0.22
SOD1-201ENST00000270142 STOML1Q9UBI4 398 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms