RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 FYTTD1Q96QD9 318 aaKnown RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 TMEM43Q9BTV4 400 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 RPP25Q9BUL9 199 aaKnown RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 YIPF2Q9BWQ6 316 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 HDHD5Q9BXW7 423 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 UBQLN3Q9H347 655 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 MTHFD2LQ9H903 347 aaPredicted RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 RANGRFQ9HD47 186 aaPredicted RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 EQTNQ9NQ60 294 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 RBFOX1Q9NWB1 397 aaKnown RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 COMMD3Q9UBI1 195 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 SIRT4Q9Y6E7 314 aaPredicted RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 TBC1D3KA0A087X1G2 549 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 CENPVL1A0A0U1RR11 272 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 GSAPA4D1B5 854 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 TBC1D3FA6NER0 549 aaPredicted RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 A6NL46 340 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 TTC36A6NLP5 189 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 DUXAA6NLW8 204 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 CENPBD1B2RD01 187 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 C2CD4DB7Z1M9 353 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 SGK494L7N484 410 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 DVL2O14641 736 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 CASKO14936 926 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 AKAP8O43823 692 aaKnown RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 CSF2P04141 144 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 HMGN1P05114 100 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 CELP19835 753 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 RPS4Y1P22090 263 aaKnown RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 CMPK1P30085 196 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 IGFALSP35858 605 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 MAP2K3P46734 347 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 AVPR1BP47901 424 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 RNF144AP50876 292 aaPredicted RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 RGS8P57771 180 aaPredicted RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 STXBP1P61764 594 aaKnown RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 ZNF791Q3KP31 576 aaPredicted RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 TBC1D3GQ6DHY5 549 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 TANGO2Q6ICL3 276 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 VITQ6UXI7 678 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 ZNF836Q6ZNA1 936 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 PLEKHM3Q6ZWE6 761 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 C16orf62Q7Z3J2 963 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 NOXA1Q86UR1 476 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 GALNT12Q8IXK2 581 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 TCTE3Q8IZS6 198 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 KCT2Q8NC54 265 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 FLVCR1-AS1Q8TAF5 88 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 GAL3ST3Q96A11 431 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 TM4SF19Q96DZ7 209 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 SAMD8Q96LT4 415 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 RIPOR3Q96MK2 946 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 DDX28Q9NUL7 540 aaKnown RBP11.59□□□□□ -0.55
BEST3-201ENST00000266661 KLHL28Q9NXS3 571 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 NLGN3Q9NZ94 848 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 DOCK9Q9BZ29 2069 aa11.59□□□□□ -0.55
BEST3-201ENST00000266661 USP34Q70CQ2 3546 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 TTC28Q96AY4 2481 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 A0A1W2PP55 124 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 CHST10O43529 356 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 NARSO43776 548 aaKnown RBP11.58□□□□□ -0.56
BEST3-201ENST00000266661 NCR1O76036 304 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 ADH1BP00325 375 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 NDUFV2P19404 249 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 TBXA2RP21731 343 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 CFL1P23528 166 aaKnown RBP11.58□□□□□ -0.56
BEST3-201ENST00000266661 BTN3A2P78410 334 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 DUSP8Q13202 625 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 RUNX3Q13761 415 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 FHL5Q5TD97 284 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 RRM2BQ7LG56 351 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 DGLUCYQ7Z3D6 616 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 ZNF438Q7Z4V0 828 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 CPOQ8IVL8 374 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 Q8N402 240 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 OR2T33Q8NG76 320 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 NEIL3Q8TAT5 605 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 ADAMTS15Q8TE58 950 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 CDS1Q92903 461 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 KISS1RQ969F8 398 aaPredicted RBP11.58□□□□□ -0.56
BEST3-201ENST00000266661 MS4A4EQ96PG1 132 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 SECISBP2Q96T21 854 aaKnown RBP11.58□□□□□ -0.56
BEST3-201ENST00000266661 TMED9Q9BVK6 235 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 FN3KQ9H479 309 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 PLSCR3Q9NRY6 295 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 KLHL21Q9UJP4 597 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 SLC13A4Q9UKG4 626 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 CSNK1G3Q9Y6M4 447 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 ZNF780BQ9Y6R6 833 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 SNRNP200O75643 2136 aaKnown RBP11.58□□□□□ -0.56
BEST3-201ENST00000266661 NUMA1Q14980 2115 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 WDFY4Q6ZS81 3184 aa11.58□□□□□ -0.56
BEST3-201ENST00000266661 ATG2BQ96BY7 2078 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 ANKRD34BA5PLL1 514 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 ISM1B1AKI9 464 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 GTPBP1O00178 669 aaKnown RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 BHLHE40O14503 412 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 TRIM3O75382 744 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms