RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 OR4C3Q8NH37 302 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 OR2W6PQ8NHA6 318 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 CLHC1Q8NHS4 586 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 ZFP28Q8NHY6 868 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 FAM110BQ8TC76 370 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 GPR151Q8TDV0 419 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 FIG4Q92562 907 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 MBD6Q96DN6 1003 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 GIMAP5Q96F15 307 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 APOPT1Q96IL0 206 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 PIGQQ9BRB3 760 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 TBL1XR1Q9BZK7 514 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 PLEKHF2Q9H8W4 249 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 EQTNQ9NQ60 294 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 SLC17A7Q9P2U7 560 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 PACSIN3Q9UKS6 424 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 PLEKHA6Q9Y2H5 1048 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 ZFHX3Q15911 3703 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 ALG1L2C9J202 215 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 NPHS1O60500 1241 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 KCNK2O95069 426 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 HRGP04196 525 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 NGFRP08138 427 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 TBXA2RP21731 343 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 KIR2DL2P43627 348 aaPredicted RBP8.76□□□□□ -1.01
VPS41-201ENST00000265745 CPA2P48052 419 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 PRKAG1P54619 331 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 DIO3P55073 304 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 CLDN20P56880 219 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 RPL38P63173 70 aaKnown RBP8.76□□□□□ -1.01
VPS41-201ENST00000265745 OCRLQ01968 901 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 FAM27E3Q08E93 113 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.76□□□□□ -1.01
VPS41-201ENST00000265745 GRAMD1BQ3KR37 738 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 GALNTL6Q49A17 601 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 EXOSC6Q5RKV6 272 aaKnown RBP8.76□□□□□ -1.01
VPS41-201ENST00000265745 P4HA3Q7Z4N8 544 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 TGIF2LYQ8IUE0 185 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 SLC16A11Q8NCK7 471 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 CHDHQ8NE62 594 aaPredicted RBP8.76□□□□□ -1.01
VPS41-201ENST00000265745 NUP43Q8NFH3 380 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 TWIST2Q8WVJ9 160 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 MTERF3Q96E29 417 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 C16orf58Q96GQ5 468 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 MS4A4EQ96PG1 132 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 FAM111AQ96PZ2 611 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 YIPF4Q9BSR8 244 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 MECRQ9BV79 373 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 RNF122Q9H9V4 155 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 EML4Q9HC35 981 aaKnown RBP8.76□□□□□ -1.01
VPS41-201ENST00000265745 LGALS13Q9UHV8 139 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 ATP6V1HQ9UI12 483 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 ZNF175Q9Y473 711 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 AP4B1Q9Y6B7 739 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 NCKAP5O14513 1909 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 ITPR3Q14573 2671 aa8.76□□□□□ -1.01
VPS41-201ENST00000265745 A0A1W2PPR1 153 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 SH3D21A4FU49 640 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 TMEM114B3SHH9 223 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 H3BML4 177 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 CASKO14936 926 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 PIP5K1BO14986 540 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 SEC14L5O43304 696 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 EMC8O43402 210 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 SPAG7O75391 227 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 OXSR1O95747 527 aaPredicted RBP8.75□□□□□ -1.01
VPS41-201ENST00000265745 CGAP01215 116 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 ACP2P11117 423 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 LAMP1P11279 417 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 CD99P14209 185 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 ARRB2P32121 409 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 ASMTP46597 345 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 VSNL1P62760 191 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 MLC1Q15049 377 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 PON3Q15166 354 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 GUSBP1Q15486 140 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 DUSP5Q16690 384 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 FBXW10Q5XX13 1052 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 MFSD12Q6NUT3 480 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 ZCCHC12Q6PEW1 402 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 FIGNL1Q6PIW4 674 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 ZNF474Q6S9Z5 364 aaPredicted RBP8.75□□□□□ -1.01
VPS41-201ENST00000265745 PAMR1Q6UXH9 720 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 LRIG3Q6UXM1 1119 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 R3HCC1LQ7Z5L2 792 aaKnown RBP8.75□□□□□ -1.01
VPS41-201ENST00000265745 CAMKMTQ7Z624 323 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 ZAR1Q86SH2 424 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 GALNT10Q86SR1 603 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 DDIASQ8IXT1 998 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 RIBC1Q8N443 379 aaPredicted RBP8.75□□□□□ -1.01
VPS41-201ENST00000265745 METTL25Q8N6Q8 603 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 CNEP1R1Q8N9A8 125 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 OR6Y1Q8NGX8 325 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 FNDC9Q8TBE3 224 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 TCP10LQ8TDR4 215 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 SLC9A6Q92581 669 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 FAM120BQ96EK7 910 aaKnown RBP8.75□□□□□ -1.01
VPS41-201ENST00000265745 PGM2Q96G03 612 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 ZNF845Q96IR2 970 aaPredicted RBP8.75□□□□□ -1.01
VPS41-201ENST00000265745 PPP3R2Q96LZ3 170 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms